RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 KLF2Q9Y5W3 355 aaPredicted RBP11.63□□□□□ -0.55
TMEM258-202ENST00000535042 U3KQV3 271 aa11.63□□□□□ -0.55
TMEM258-202ENST00000535042 EFCAB9A8MZ26 197 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 PRSS44E7EML9 344 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 BLOC1S5-TXNDC5H3BN57 136 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 KLF4O43474 513 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 MRPL33O75394 65 aaKnown RBP11.62□□□□□ -0.55
TMEM258-202ENST00000535042 TIPRLO75663 272 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 OR6A2O95222 327 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 CST1P01037 141 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 IGHV3-9P01782 118 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 HIST1H2ABP04908 130 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 SAGP10523 405 aaPredicted RBP11.62□□□□□ -0.55
TMEM258-202ENST00000535042 ZNF26P17031 533 aaPredicted RBP11.62□□□□□ -0.55
TMEM258-202ENST00000535042 ZNF43P17038 809 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 AHCYP23526 432 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 COL8A1P27658 744 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 UQCRC1P31930 480 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 SELENOPP49908 381 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 CLDN17P56750 224 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 ACTR3P61158 418 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 IL1RL1Q01638 556 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 RPL18Q07020 188 aaKnown RBP11.62□□□□□ -0.55
TMEM258-202ENST00000535042 FAM27E3Q08E93 113 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 SNTB1Q13884 538 aaKnown RBP11.62□□□□□ -0.55
TMEM258-202ENST00000535042 C1DQ13901 141 aaKnown RBP11.62□□□□□ -0.55
TMEM258-202ENST00000535042 ZNF770Q6IQ21 691 aaPredicted RBP11.62□□□□□ -0.55
TMEM258-202ENST00000535042 HIST3H2AQ7L7L0 130 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 AAED1Q7RTV5 226 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 PXKQ7Z7A4 578 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 TMEM179BQ7Z7N9 219 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 OR51A7Q8NH64 312 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 HIST1H2ACQ93077 130 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 RNASE6Q93091 150 aaKnown RBP11.62□□□□□ -0.55
TMEM258-202ENST00000535042 TNFRSF13CQ96RJ3 184 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 RBM24Q9BX46 236 aaKnown RBP11.62□□□□□ -0.55
TMEM258-202ENST00000535042 DENND2DQ9H6A0 471 aaPredicted RBP11.62□□□□□ -0.55
TMEM258-202ENST00000535042 REEP1Q9H902 201 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 MED29Q9NX70 200 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 GALNT8Q9NY28 637 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 HIF3AQ9Y2N7 669 aa11.62□□□□□ -0.55
TMEM258-202ENST00000535042 SAMHD1Q9Y3Z3 626 aaKnown RBP11.62□□□□□ -0.55
TMEM258-202ENST00000535042 TRAV27A0A087WT01 109 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 ANKRD65E5RJM6 399 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 OR10H3O60404 316 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 PTP4A3O75365 173 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 SERPINI2O75830 405 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 ZNF432O94892 652 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 F13BP05160 661 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 FOXG1P55316 489 aaPredicted RBP11.61□□□□□ -0.55
TMEM258-202ENST00000535042 RPS4XP62701 263 aaKnown RBP11.61□□□□□ -0.55
TMEM258-202ENST00000535042 POU3F1Q03052 451 aaPredicted RBP11.61□□□□□ -0.55
TMEM258-202ENST00000535042 LGALS3BPQ08380 585 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 TSPO2Q5TGU0 170 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 HIST2H2BCQ6DN03 193 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 PGBD2Q6P3X8 592 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 NIPAL3Q6P499 406 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 CASP12Q6UXS9 341 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 OAFQ86UD1 273 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 UEVLDQ8IX04 471 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 ZNF100Q8IYN0 542 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 CDK20Q8IZL9 346 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 GABRG1Q8N1C3 465 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 LRRC75AQ8NAA5 344 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 OR9Q2Q8NGE9 314 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 APH1AQ96BI3 265 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 EMC6Q9BV81 110 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 NTN4Q9HB63 628 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 MCCC2Q9HCC0 563 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 ARMC1Q9NVT9 282 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 PLEKHB1Q9UF11 243 aaPredicted RBP11.61□□□□□ -0.55
TMEM258-202ENST00000535042 TMCC3Q9ULS5 477 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 TMEM5Q9Y2B1 443 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 NOX1Q9Y5S8 564 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 LRRK2Q5S007 2527 aa11.61□□□□□ -0.55
TMEM258-202ENST00000535042 INTS1Q8N201 2190 aaKnown RBP11.61□□□□□ -0.55
TMEM258-202ENST00000535042 RNF13O43567 381 aa11.6□□□□□ -0.55
TMEM258-202ENST00000535042 CCNB2O95067 398 aa11.6□□□□□ -0.55
TMEM258-202ENST00000535042 IFNGR1P15260 489 aa11.6□□□□□ -0.55
TMEM258-202ENST00000535042 HOXB6P17509 224 aaKnown RBP11.6□□□□□ -0.55
TMEM258-202ENST00000535042 IGFBP2P18065 325 aa11.6□□□□□ -0.55
TMEM258-202ENST00000535042 GSSP48637 474 aa11.6□□□□□ -0.55
TMEM258-202ENST00000535042 SLC9A3P48764 834 aa11.6□□□□□ -0.55
TMEM258-202ENST00000535042 FXYD6P3P58550 94 aa11.6□□□□□ -0.55
TMEM258-202ENST00000535042 SP5Q6BEB4 398 aaPredicted RBP11.6□□□□□ -0.55
TMEM258-202ENST00000535042 C1orf94Q6P1W5 598 aa11.6□□□□□ -0.55
TMEM258-202ENST00000535042 IGFN1Q86VF2 1251 aa11.6□□□□□ -0.55
TMEM258-202ENST00000535042 ACBD4Q8NC06 268 aa11.6□□□□□ -0.55
TMEM258-202ENST00000535042 ANKK1Q8NFD2 765 aa11.6□□□□□ -0.55
TMEM258-202ENST00000535042 RAB3IPQ96QF0 476 aaPredicted RBP11.6□□□□□ -0.55
TMEM258-202ENST00000535042 ENKD1Q9H0I2 346 aa11.6□□□□□ -0.55
TMEM258-202ENST00000535042 YY1AP1Q9H869 796 aa11.6□□□□□ -0.55
TMEM258-202ENST00000535042 SLC7A10Q9NS82 523 aa11.6□□□□□ -0.55
TMEM258-202ENST00000535042 PARPBPQ9NWS1 579 aa11.6□□□□□ -0.55
TMEM258-202ENST00000535042 DNAJB9Q9UBS3 223 aa11.6□□□□□ -0.55
TMEM258-202ENST00000535042 RCE1Q9Y256 329 aa11.6□□□□□ -0.55
TMEM258-202ENST00000535042 SIGLEC7Q9Y286 467 aa11.6□□□□□ -0.55
TMEM258-202ENST00000535042 AP4S1Q9Y587 144 aa11.6□□□□□ -0.55
TMEM258-202ENST00000535042 SLC35F4A4IF30 521 aa11.59□□□□□ -0.55
TMEM258-202ENST00000535042 UNC119BA6NIH7 251 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms