RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 VNN3Q9NY84 501 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 SLC7A8Q9UHI5 535 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 FOXD3Q9UJU5 478 aaPredicted RBP12.38□□□□□ -0.43
VPS11-205ENST00000534551 ZNF229Q9UJW7 825 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 CORINQ9Y5Q5 1042 aa12.38□□□□□ -0.43
VPS11-205ENST00000534551 TRAV27A0A087WT01 109 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 GPR171O14626 319 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 SIAH2O43255 324 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 UPK3AO75631 287 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 THBDP07204 575 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 ITGA5P08648 1049 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 ZNF43P17038 809 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 COX5AP20674 150 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 RRM2P31350 389 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 DNAJA1P31689 397 aaKnown RBP12.37□□□□□ -0.43
VPS11-205ENST00000534551 KRTAP10-9P60411 292 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 RPL18Q07020 188 aaKnown RBP12.37□□□□□ -0.43
VPS11-205ENST00000534551 FAPQ12884 760 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 PPP1R8Q12972 351 aaKnown RBP12.37□□□□□ -0.43
VPS11-205ENST00000534551 C1DQ13901 141 aaKnown RBP12.37□□□□□ -0.43
VPS11-205ENST00000534551 PHYHD1Q5SRE7 291 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 ALKBH2Q6NS38 261 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 BEND4Q6ZU67 534 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 IGFN1Q86VF2 1251 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 KIF18BQ86Y91 864 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 ADGRG5Q8IZF4 528 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 ACOT11Q8WXI4 607 aaPredicted RBP12.37□□□□□ -0.43
VPS11-205ENST00000534551 S100PBPQ96BU1 408 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 FAM46AQ96IP4 442 aaKnown RBP12.37□□□□□ -0.43
VPS11-205ENST00000534551 WFIKKN1Q96NZ8 548 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 FUZQ9BT04 418 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 ACTR6Q9GZN1 396 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 LRMDAQ9H2I8 198 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 SLCO5A1Q9H2Y9 848 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 ELOVL5Q9NYP7 299 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 TAS2R5Q9NYW4 299 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 POMPQ9Y244 141 aa12.37□□□□□ -0.43
VPS11-205ENST00000534551 FAM32AQ9Y421 112 aaKnown RBP12.37□□□□□ -0.43
VPS11-205ENST00000534551 ABCA12Q86UK0 2595 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 C16orf97H3BN30 126 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 CDC42EP2O14613 210 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 RAD51DO75771 328 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 ZNF432O94892 652 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 F13BP05160 661 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 IFNGR1P15260 489 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 PSMB1P20618 241 aaKnown RBP12.36□□□□□ -0.43
VPS11-205ENST00000534551 AQP2P41181 271 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 FLOT2Q14254 428 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 MFSD13AQ14CX5 517 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 LAPTM4AQ15012 233 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 MTX3Q5HYI7 312 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 FBXW9Q5XUX1 488 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 NHLRC1Q6VVB1 395 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 Q6ZT83 130 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 MBOAT2Q6ZWT7 520 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 MCUR1Q96AQ8 359 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 BPIFA2Q96DR5 249 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 LRGUKQ96M69 825 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 HS6ST2Q96MM7 605 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 OR2M2Q96R28 347 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 MED18Q9BUE0 208 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 IL1RAPQ9NPH3 570 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 MALT1Q9UDY8 824 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 AURKCQ9UQB9 309 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 ABCA4P78363 2273 aa12.36□□□□□ -0.43
VPS11-205ENST00000534551 APCP25054 2843 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 A0A1W2PR80 420 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 A0A1W2PRQ8 180 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 BLOC1S5-TXNDC5H3BN57 136 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 PDLIM1O00151 329 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 RNF13O43567 381 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 SEC14L2O76054 403 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 VAMP5O95183 116 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 OR6A2O95222 327 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 GADD45GO95257 159 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 SAGP10523 405 aaPredicted RBP12.35□□□□□ -0.43
VPS11-205ENST00000534551 ZNF26P17031 533 aaPredicted RBP12.35□□□□□ -0.43
VPS11-205ENST00000534551 CDH2P19022 906 aaPredicted RBP12.35□□□□□ -0.43
VPS11-205ENST00000534551 IL32P24001 234 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 IFNA8P32881 189 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 MAGEA2P43356 314 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 TLE4Q04727 773 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 PRKCDQ05655 676 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 TOP3AQ13472 1001 aaPredicted RBP12.35□□□□□ -0.43
VPS11-205ENST00000534551 CAMK2DQ13557 499 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 FHL1Q13642 323 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 DGCR6Q14129 220 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 STK11Q15831 433 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 SFRP5Q5T4F7 317 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 BHLHA15Q7RTS1 189 aaPredicted RBP12.35□□□□□ -0.43
VPS11-205ENST00000534551 SPATA24Q86W54 205 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 TMEM123Q8N131 208 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 ZNF433Q8N7K0 673 aaPredicted RBP12.35□□□□□ -0.43
VPS11-205ENST00000534551 OR4K5Q8NGD3 323 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 CANT1Q8WVQ1 401 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 KISS1RQ969F8 398 aaPredicted RBP12.35□□□□□ -0.43
VPS11-205ENST00000534551 UTP4Q969X6 686 aaKnown RBP12.35□□□□□ -0.43
VPS11-205ENST00000534551 GPA33Q99795 319 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 UPB1Q9UBR1 384 aa12.35□□□□□ -0.43
VPS11-205ENST00000534551 ITPR2Q14571 2701 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms