RNA–Protein interactions for RNA: ENST00000534412.5

PICALM-223, Transcript of phosphatidylinositol binding clathrin assembly protein, human

TSL 5

Gene PICALM, Length 811 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PICALM-223	ENST00000534412	GABRA3	P34903	492 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	SRP14	P37108	136 aa	Known RBP	5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	MAGEA12	P43365	314 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	RFX3	P48380	749 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	ZNF83	P51522	516 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	CDH15	P55291	814 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	CFHR3	Q02985	330 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	DAG1	Q14118	895 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	TRADD	Q15628	312 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	VPS26B	Q4G0F5	336 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	C1QTNF12	Q5T7M4	302 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	FAM219B	Q5XKK7	198 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	FBXW9	Q5XUX1	488 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	ABLIM2	Q6H8Q1	611 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	ANKRD13B	Q86YJ7	626 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	KLHL7	Q8IXQ5	586 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	SLC35F6	Q8N357	371 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	C3orf56	Q8N813	242 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	CEP112	Q8N8E3	955 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	OR52N5	Q8NH56	324 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	B4GALNT2	Q8NHY0	566 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	C16orf78	Q8WTQ4	265 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	FAM216A	Q8WUB2	273 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	PIK3R3	Q92569	461 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	C3orf49	Q96BT1	292 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	PHF21B	Q96EK2	531 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	SH3YL1	Q96HL8	342 aa	Predicted RBP	5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	AMDHD1	Q96NU7	426 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	MUS81	Q96NY9	551 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	FOXN4	Q96NZ1	517 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	ZNF300	Q96RE9	604 aa	Predicted RBP	5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	BBS4	Q96RK4	519 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	ARPC5L	Q9BPX5	153 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	TRMO	Q9BU70	441 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	TRIM31	Q9BZY9	425 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	GLIPR2	Q9H4G4	154 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	ZNF696	Q9H7X3	374 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	UBQLN4	Q9NRR5	601 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	TAS2R16	Q9NYV7	291 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	STEAP1	Q9UHE8	339 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	ICAM5	Q9UMF0	924 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	NFU1	Q9UMS0	254 aa		5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	KMT2C	Q8NEZ4	4911 aa	Known RBP	5.24	□□□□□ -1.57
PICALM-223	ENST00000534412	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	IGHV3-15	A0A0B4J1V0	119 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	LRP5L	A4QPB2	252 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	ATP6V1G2-DDX39B	F2Z307	99 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	CLIC1	O00299	241 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	MANBA	O00462	879 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	ZNF195	O14628	629 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	PDE5A	O76074	875 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	KCNK2	O95069	426 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	KRT6A	P02538	564 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	KRT6B	P04259	564 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	RBP1	P09455	135 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	CHN1	P15882	459 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	TCP1	P17987	556 aa	Known RBP	5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	PCMT1	P22061	227 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	IL2RG	P31785	369 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	KRT6C	P48668	564 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	SERPINB8	P50452	374 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	DVL1P1	P54792	670 aa	Predicted RBP	5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	CDH13	P55290	713 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	HILS1	P60008	231 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	SNRPD2	P62316	118 aa	Known RBP	5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	ACTG1	P63261	375 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	ZNF117	Q03924	483 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	ACSM2A	Q08AH3	577 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	ZNF763	Q0D2J5	394 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	RASGEF1B	Q0VAM2	473 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	SELENBP1	Q13228	472 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	PMS2P11	Q13670	270 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	MFSD13A	Q14CX5	517 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	PDK3	Q15120	406 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	GABRA6	Q16445	453 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	TMEM176B	Q3YBM2	270 aa	Predicted RBP	5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	IQCC	Q4KMZ1	466 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	SLC25A53	Q5H9E4	307 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	FAM209B	Q5JX69	171 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	ACSM2B	Q68CK6	577 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	OR7E24	Q6IFN5	339 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	FAM71E1	Q6IPT2	247 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	MZT2A	Q6P582	158 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	CBLN3	Q6UW01	205 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	USP43	Q70EL4	1123 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	RPS27L	Q71UM5	84 aa	Known RBP	5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	MTERF4	Q7Z6M4	381 aa	Known RBP	5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	GALNT5	Q7Z7M9	940 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	LRRC8A	Q8IWT6	810 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	C17orf78	Q8N4C9	275 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	OR2C3	Q8N628	320 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	CDRT4	Q8N9R6	151 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	GATS	Q8NAP1	163 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	OR6Y1	Q8NGX8	325 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	GPR151	Q8TDV0	419 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	ZNF524	Q96C55	264 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	GIMAP5	Q96F15	307 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	HIST1H2AA	Q96QV6	131 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	ZNF382	Q96SR6	550 aa		5.23	□□□□□ -1.57
PICALM-223	ENST00000534412	FKRP	Q9H9S5	495 aa		5.23	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms