RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 ZNF501Q96CX3 271 aaPredicted RBP8.8□□□□□ -1
CHKA-207ENST00000533728 TTYH2Q9BSA4 534 aa8.8□□□□□ -1
CHKA-207ENST00000533728 HCAR1Q9BXC0 346 aa8.8□□□□□ -1
CHKA-207ENST00000533728 NXF5Q9H1B4 397 aaKnown RBP8.8□□□□□ -1
CHKA-207ENST00000533728 FKRPQ9H9S5 495 aa8.8□□□□□ -1
CHKA-207ENST00000533728 ABCB9Q9NP78 766 aa8.8□□□□□ -1
CHKA-207ENST00000533728 PNO1Q9NRX1 252 aaKnown RBP8.8□□□□□ -1
CHKA-207ENST00000533728 RYDENQ9NUL5 291 aaKnown RBP8.8□□□□□ -1
CHKA-207ENST00000533728 COPS7AQ9UBW8 275 aa8.8□□□□□ -1
CHKA-207ENST00000533728 PPIEQ9UNP9 301 aaKnown RBP8.8□□□□□ -1
CHKA-207ENST00000533728 COL27A1Q8IZC6 1860 aaPredicted RBP8.8□□□□□ -1
CHKA-207ENST00000533728 CSMD2Q7Z408 3487 aa8.79□□□□□ -1
CHKA-207ENST00000533728 IGKV1D-42A0A075B6H8 117 aa8.79□□□□□ -1
CHKA-207ENST00000533728 FABP12A6NFH5 140 aa8.79□□□□□ -1
CHKA-207ENST00000533728 GLCEO94923 617 aa8.79□□□□□ -1
CHKA-207ENST00000533728 MT-ATP6P00846 226 aa8.79□□□□□ -1
CHKA-207ENST00000533728 ASAH2BP0C7U1 165 aa8.79□□□□□ -1
CHKA-207ENST00000533728 TRAPPC2P0DI81 140 aa8.79□□□□□ -1
CHKA-207ENST00000533728 TRAPPC2BP0DI82 140 aa8.79□□□□□ -1
CHKA-207ENST00000533728 UQCRC1P31930 480 aa8.79□□□□□ -1
CHKA-207ENST00000533728 CSF2RBP32927 897 aa8.79□□□□□ -1
CHKA-207ENST00000533728 RPS5P46782 204 aaKnown RBP8.79□□□□□ -1
CHKA-207ENST00000533728 TGM4P49221 684 aa8.79□□□□□ -1
CHKA-207ENST00000533728 PPM1FP49593 454 aaPredicted RBP8.79□□□□□ -1
CHKA-207ENST00000533728 GBX2P52951 348 aaPredicted RBP8.79□□□□□ -1
CHKA-207ENST00000533728 DLX5P56178 289 aa8.79□□□□□ -1
CHKA-207ENST00000533728 RPS7P62081 194 aaKnown RBP8.79□□□□□ -1
CHKA-207ENST00000533728 RTP5Q14D33 572 aa8.79□□□□□ -1
CHKA-207ENST00000533728 HACD4Q5VWC8 232 aa8.79□□□□□ -1
CHKA-207ENST00000533728 NKAIN2Q5VXU1 208 aa8.79□□□□□ -1
CHKA-207ENST00000533728 HBMQ6B0K9 141 aa8.79□□□□□ -1
CHKA-207ENST00000533728 FAAH2Q6GMR7 532 aa8.79□□□□□ -1
CHKA-207ENST00000533728 RPL22L1Q6P5R6 122 aaKnown RBP8.79□□□□□ -1
CHKA-207ENST00000533728 CCBE1Q6UXH8 406 aaPredicted RBP8.79□□□□□ -1
CHKA-207ENST00000533728 GDPD3Q7L5L3 318 aa8.79□□□□□ -1
CHKA-207ENST00000533728 SLC29A4Q7RTT9 530 aa8.79□□□□□ -1
CHKA-207ENST00000533728 KCTD20Q7Z5Y7 419 aa8.79□□□□□ -1
CHKA-207ENST00000533728 BPHLQ86WA6 291 aaPredicted RBP8.79□□□□□ -1
CHKA-207ENST00000533728 TMPRSS12Q86WS5 348 aa8.79□□□□□ -1
CHKA-207ENST00000533728 ZNF248Q8NDW4 579 aa8.79□□□□□ -1
CHKA-207ENST00000533728 OR52E2Q8NGJ4 325 aa8.79□□□□□ -1
CHKA-207ENST00000533728 PHOSPHO1Q8TCT1 267 aa8.79□□□□□ -1
CHKA-207ENST00000533728 OTULINQ96BN8 352 aa8.79□□□□□ -1
CHKA-207ENST00000533728 ARSGQ96EG1 525 aa8.79□□□□□ -1
CHKA-207ENST00000533728 DIRAS2Q96HU8 199 aa8.79□□□□□ -1
CHKA-207ENST00000533728 CMTM3Q96MX0 182 aa8.79□□□□□ -1
CHKA-207ENST00000533728 ELF4Q99607 663 aaPredicted RBP8.79□□□□□ -1
CHKA-207ENST00000533728 ATF6BQ99941 703 aa8.79□□□□□ -1
CHKA-207ENST00000533728 NUDT9Q9BW91 350 aa8.79□□□□□ -1
CHKA-207ENST00000533728 OR51V1Q9H2C8 321 aa8.79□□□□□ -1
CHKA-207ENST00000533728 ZCCHC4Q9H5U6 513 aa8.79□□□□□ -1
CHKA-207ENST00000533728 MED20Q9H944 212 aa8.79□□□□□ -1
CHKA-207ENST00000533728 MMP25Q9NPA2 562 aa8.79□□□□□ -1
CHKA-207ENST00000533728 YARS2Q9Y2Z4 477 aaKnown RBP8.79□□□□□ -1
CHKA-207ENST00000533728 IER3IP1Q9Y5U9 82 aa8.79□□□□□ -1
CHKA-207ENST00000533728 NPFFR2Q9Y5X5 522 aa8.79□□□□□ -1
CHKA-207ENST00000533728 CSPG4Q6UVK1 2322 aa8.79□□□□□ -1
CHKA-207ENST00000533728 A0A1B0GVT2 93 aa8.78□□□□□ -1
CHKA-207ENST00000533728 OR6C70A6NIJ9 312 aa8.78□□□□□ -1
CHKA-207ENST00000533728 MCIDASD6RGH6 385 aa8.78□□□□□ -1
CHKA-207ENST00000533728 SDC3O75056 442 aa8.78□□□□□ -1
CHKA-207ENST00000533728 REM1O75628 298 aa8.78□□□□□ -1
CHKA-207ENST00000533728 ARL6IP5O75915 188 aa8.78□□□□□ -1
CHKA-207ENST00000533728 CER1O95813 267 aa8.78□□□□□ -1
CHKA-207ENST00000533728 DLGAP3O95886 979 aa8.78□□□□□ -1
CHKA-207ENST00000533728 CLEC2LP0C7M8 214 aa8.78□□□□□ -1
CHKA-207ENST00000533728 IL7P13232 177 aa8.78□□□□□ -1
CHKA-207ENST00000533728 FOLR1P15328 257 aa8.78□□□□□ -1
CHKA-207ENST00000533728 HIST1H1CP16403 213 aaKnown RBP8.78□□□□□ -1
CHKA-207ENST00000533728 NAGAP17050 411 aa8.78□□□□□ -1
CHKA-207ENST00000533728 PGCP20142 388 aa8.78□□□□□ -1
CHKA-207ENST00000533728 ALAS2P22557 587 aa8.78□□□□□ -1
CHKA-207ENST00000533728 MYL9P24844 172 aa8.78□□□□□ -1
CHKA-207ENST00000533728 EPHA8P29322 1005 aaPredicted RBP8.78□□□□□ -1
CHKA-207ENST00000533728 IL12BP29460 328 aa8.78□□□□□ -1
CHKA-207ENST00000533728 SDHAP31040 664 aa8.78□□□□□ -1
CHKA-207ENST00000533728 RPL4P36578 427 aaKnown RBP8.78□□□□□ -1
CHKA-207ENST00000533728 HTR3AP46098 478 aa8.78□□□□□ -1
CHKA-207ENST00000533728 OR1D4P47884 311 aa8.78□□□□□ -1
CHKA-207ENST00000533728 EVX1P49640 407 aa8.78□□□□□ -1
CHKA-207ENST00000533728 SEPHS1P49903 392 aa8.78□□□□□ -1
CHKA-207ENST00000533728 SUMO3P55854 103 aaPredicted RBP8.78□□□□□ -1
CHKA-207ENST00000533728 FOXK1P85037 733 aa8.78□□□□□ -1
CHKA-207ENST00000533728 MXD1Q05195 221 aa8.78□□□□□ -1
CHKA-207ENST00000533728 EFR3AQ14156 821 aa8.78□□□□□ -1
CHKA-207ENST00000533728 KCNAB1Q14722 419 aa8.78□□□□□ -1
CHKA-207ENST00000533728 SHBQ15464 509 aa8.78□□□□□ -1
CHKA-207ENST00000533728 CD226Q15762 336 aa8.78□□□□□ -1
CHKA-207ENST00000533728 IGFBP7Q16270 282 aa8.78□□□□□ -1
CHKA-207ENST00000533728 CCDC157Q569K6 752 aa8.78□□□□□ -1
CHKA-207ENST00000533728 SLC6A19Q695T7 634 aa8.78□□□□□ -1
CHKA-207ENST00000533728 FAM131AQ6UXB0 335 aa8.78□□□□□ -1
CHKA-207ENST00000533728 FAM122BQ7Z309 247 aa8.78□□□□□ -1
CHKA-207ENST00000533728 LRRC28Q86X40 367 aaPredicted RBP8.78□□□□□ -1
CHKA-207ENST00000533728 SNX29P2Q8IUI4 249 aa8.78□□□□□ -1
CHKA-207ENST00000533728 SLC35F2Q8IXU6 374 aa8.78□□□□□ -1
CHKA-207ENST00000533728 OR8H2Q8N162 312 aa8.78□□□□□ -1
CHKA-207ENST00000533728 METTL27Q8N6F8 245 aaPredicted RBP8.78□□□□□ -1
CHKA-207ENST00000533728 ZFP41Q8N8Y5 198 aa8.78□□□□□ -1
CHKA-207ENST00000533728 SYT14Q8NB59 555 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms