RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 C17orf78Q8N4C9 275 aa9.92□□□□□ -0.82
CLCF1-202ENST00000533438 ZIC4Q8N9L1 334 aa9.92□□□□□ -0.82
CLCF1-202ENST00000533438 WDR31Q8NA23 367 aa9.92□□□□□ -0.82
CLCF1-202ENST00000533438 HIPK4Q8NE63 616 aa9.92□□□□□ -0.82
CLCF1-202ENST00000533438 C1orf162Q8NEQ5 155 aaPredicted RBP9.92□□□□□ -0.82
CLCF1-202ENST00000533438 MAL2Q969L2 176 aa9.92□□□□□ -0.82
CLCF1-202ENST00000533438 GTPBP3Q969Y2 492 aaKnown RBP9.92□□□□□ -0.82
CLCF1-202ENST00000533438 C3orf49Q96BT1 292 aa9.92□□□□□ -0.82
CLCF1-202ENST00000533438 CCDC124Q96CT7 223 aaKnown RBP9.92□□□□□ -0.82
CLCF1-202ENST00000533438 BOD1Q96IK1 185 aa9.92□□□□□ -0.82
CLCF1-202ENST00000533438 ZNF385AQ96PM9 386 aaKnown RBP9.92□□□□□ -0.82
CLCF1-202ENST00000533438 RSPO3Q9BXY4 272 aaPredicted RBP9.92□□□□□ -0.82
CLCF1-202ENST00000533438 PCDHAC1Q9H158 963 aa9.92□□□□□ -0.82
CLCF1-202ENST00000533438 ACTR3BQ9P1U1 418 aa9.92□□□□□ -0.82
CLCF1-202ENST00000533438 UPB1Q9UBR1 384 aa9.92□□□□□ -0.82
CLCF1-202ENST00000533438 MAGEL2Q9UJ55 1249 aa9.92□□□□□ -0.82
CLCF1-202ENST00000533438 GDF2Q9UK05 429 aaPredicted RBP9.92□□□□□ -0.82
CLCF1-202ENST00000533438 IFT52Q9Y366 437 aa9.92□□□□□ -0.82
CLCF1-202ENST00000533438 SNX13Q9Y5W8 968 aa9.92□□□□□ -0.82
CLCF1-202ENST00000533438 HIVEP2P31629 2446 aa9.92□□□□□ -0.82
CLCF1-202ENST00000533438 CHD3Q12873 2000 aaKnown RBP9.91□□□□□ -0.82
CLCF1-202ENST00000533438 A8MVM7 634 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 RNF223E7ERA6 249 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 CXCR6O00574 342 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 ARPC2O15144 300 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 FZD7O75084 574 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 CIB2O75838 187 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 PCSK6P29122 969 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 MPGP29372 298 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 MSX2P35548 267 aaPredicted RBP9.91□□□□□ -0.82
CLCF1-202ENST00000533438 ZNF83P51522 516 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 PCBP3P57721 371 aaKnown RBP9.91□□□□□ -0.82
CLCF1-202ENST00000533438 COPZ1P61923 177 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 SCARB2Q14108 478 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 C1QTNF12Q5T7M4 302 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 INTS11Q5TA45 600 aaKnown RBP9.91□□□□□ -0.82
CLCF1-202ENST00000533438 C9orf135Q5VTT2 229 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 LCN8Q6JVE9 175 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 REEP3Q6NUK4 255 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 KLHL17Q6TDP4 642 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 B3GLCTQ6Y288 498 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 CCDC80Q76M96 950 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 CADM2Q8N3J6 435 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 OR9K2Q8NGE7 335 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 NFKBIDQ8NI38 313 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 NANOS1Q8WY41 292 aaKnown RBP9.91□□□□□ -0.82
CLCF1-202ENST00000533438 SLC35B4Q969S0 331 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 DHRS9Q9BPW9 319 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 ARMC7Q9H6L4 198 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 GORASP2Q9H8Y8 452 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 BCL2L10Q9HD36 194 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 SLC17A5Q9NRA2 495 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 EGFL7Q9UHF1 273 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 ZNF232Q9UNY5 417 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 ANGPT4Q9Y264 503 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 B3GALT5Q9Y2C3 310 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 AMDHD2Q9Y303 409 aa9.91□□□□□ -0.82
CLCF1-202ENST00000533438 YLPM1P49750 1951 aaKnown RBP9.9□□□□□ -0.82
CLCF1-202ENST00000533438 C5orf58C9J3I9 102 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 M0R1B8 84 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 GSTA4O15217 222 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 PTNP21246 168 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 KDELR2P33947 212 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 TTKP33981 857 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 PPP2R2BQ00005 443 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 TGFBR3Q03167 851 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 EGR4Q05215 589 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 FLOT2Q14254 428 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 NRF1Q16656 503 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 ZNF311Q5JNZ3 666 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 C1orf146Q5VVC0 180 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 C1orf140Q5VVS0 124 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 AGAP6Q5VW22 663 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 GLYATQ6IB77 296 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 SLC22A25Q6T423 547 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 CREB3L2Q70SY1 520 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 AAED1Q7RTV5 226 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 DHFR2Q86XF0 187 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 POMGNT2Q8NAT1 580 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 MAPK1IP1LQ8NDC0 245 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 BBS10Q8TAM1 723 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 STK35Q8TDR2 534 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 PTDSS2Q9BVG9 487 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 TAPBPLQ9BX59 468 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 REG4Q9BYZ8 158 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 BARX1Q9HBU1 254 aaPredicted RBP9.9□□□□□ -0.82
CLCF1-202ENST00000533438 CBLN4Q9NTU7 201 aa9.9□□□□□ -0.82
CLCF1-202ENST00000533438 ANK3Q12955 4377 aaKnown RBP9.89□□□□□ -0.83
CLCF1-202ENST00000533438 AQP12BA6NM10 295 aa9.89□□□□□ -0.83
CLCF1-202ENST00000533438 FTCDNL1E5RQL4 147 aa9.89□□□□□ -0.83
CLCF1-202ENST00000533438 GMNNO75496 209 aa9.89□□□□□ -0.83
CLCF1-202ENST00000533438 VAMP5O95183 116 aa9.89□□□□□ -0.83
CLCF1-202ENST00000533438 STAMBPO95630 424 aa9.89□□□□□ -0.83
CLCF1-202ENST00000533438 ETS2P15036 469 aa9.89□□□□□ -0.83
CLCF1-202ENST00000533438 NCK1P16333 377 aa9.89□□□□□ -0.83
CLCF1-202ENST00000533438 ATP6V1B2P21281 511 aa9.89□□□□□ -0.83
CLCF1-202ENST00000533438 ACTR3P61158 418 aa9.89□□□□□ -0.83
CLCF1-202ENST00000533438 MTX3Q5HYI7 312 aa9.89□□□□□ -0.83
CLCF1-202ENST00000533438 TMEM225Q6GV28 225 aa9.89□□□□□ -0.83
CLCF1-202ENST00000533438 ZNF544Q6NX49 715 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 119.9 ms