RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 SNRPEP62304 92 aaKnown RBP11.31□□□□□ -0.6
BDNF-218ENST00000533246 GBX1Q14549 363 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 TRAM1Q15629 374 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 TCTN1Q2MV58 587 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 RNF212Q495C1 297 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 RNASE10Q5GAN6 216 aaKnown RBP11.31□□□□□ -0.6
BDNF-218ENST00000533246 VASNQ6EMK4 673 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 FAM198BQ6UWH4 519 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 SENP5Q96HI0 755 aaPredicted RBP11.31□□□□□ -0.6
BDNF-218ENST00000533246 FOLH1BQ9HBA9 442 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 HINT3Q9NQE9 182 aaKnown RBP11.31□□□□□ -0.6
BDNF-218ENST00000533246 OSGIN1Q9UJX0 560 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 RCE1Q9Y256 329 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 AP1M2Q9Y6Q5 423 aa11.31□□□□□ -0.6
BDNF-218ENST00000533246 H7C1Q1 480 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 TP53I11O14683 189 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 PNPP00491 289 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 IFNA4P05014 189 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 HNF1AP20823 631 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 HLA-DMAP28067 261 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 TACR3P29371 465 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 BSGP35613 385 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 EXOSC2Q13868 293 aaKnown RBP11.3□□□□□ -0.6
BDNF-218ENST00000533246 BAK1Q16611 211 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 PRSS36Q5K4E3 855 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 LILRA6Q6PI73 481 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 LAS2Q8IYD9 372 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 GPR148Q8TDV2 347 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 C15orf40Q8WUR7 153 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 TM9SF4Q92544 642 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 KLHL15Q96M94 604 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 DCLRE1CQ96SD1 692 aaKnown RBP11.3□□□□□ -0.6
BDNF-218ENST00000533246 ZNF350Q9GZX5 532 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 SYT4Q9H2B2 425 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 KIR3DX1Q9H7L2 352 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 A4GALTQ9NPC4 353 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 FBXO8Q9NRD0 319 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 ASB6Q9NWX5 421 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 DAPP1Q9UN19 280 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 ADAM18Q9Y3Q7 739 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 LRRTM2O43300 516 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 MPIG6BO95866 241 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 ST6GAL1P15907 406 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 EIF2B1Q14232 305 aaKnown RBP11.3□□□□□ -0.6
BDNF-218ENST00000533246 PLK5Q496M5 336 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 TMEM196Q5HYL7 178 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 PDSS1Q5T2R2 415 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 PRAMEF20Q5VT98 475 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 MED25Q71SY5 747 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 IL22RA1Q8N6P7 574 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 TET1Q8NFU7 2136 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 SFXN5Q8TD22 340 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 CREB3L1Q96BA8 519 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 HAVCR1Q96D42 359 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 SDF2Q99470 211 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 POTEKPQ9BYX7 375 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 C2orf42Q9NWW7 574 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 ZNF223Q9UK11 482 aaPredicted RBP11.3□□□□□ -0.6
BDNF-218ENST00000533246 ICKQ9UPZ9 632 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 KCNIP3Q9Y2W7 256 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 MYOFQ9NZM1 2061 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 M0R036 132 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 SSX4O60224 188 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 FARS2O95363 451 aaKnown RBP11.3□□□□□ -0.6
BDNF-218ENST00000533246 LGI1O95970 557 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 INHBBP09529 407 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 SFTPCP11686 197 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 PRSS3P35030 304 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 LIM2P55344 173 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 POU3F1Q03052 451 aaPredicted RBP11.3□□□□□ -0.6
BDNF-218ENST00000533246 ZNF273Q14593 569 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 MBOAT2Q6ZWT7 520 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 ZNF440Q8IYI8 595 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 BBS1Q8NFJ9 593 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 RASD2Q96D21 266 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 OR14A2Q96R54 314 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 SUCNR1Q9BXA5 334 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 C11orf54Q9H0W9 315 aaPredicted RBP11.3□□□□□ -0.6
BDNF-218ENST00000533246 LDAHQ9H6V9 325 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 GALNT9Q9HCQ5 603 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 KLHL21Q9UJP4 597 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 FBXL2Q9UKC9 423 aa11.3□□□□□ -0.6
BDNF-218ENST00000533246 COL5A3P25940 1745 aaPredicted RBP11.29□□□□□ -0.6
BDNF-218ENST00000533246 SPTBN1Q01082 2364 aaKnown RBP11.29□□□□□ -0.6
BDNF-218ENST00000533246 OR5K3A6NET4 321 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 GAPDHSO14556 408 aaPredicted RBP11.29□□□□□ -0.6
BDNF-218ENST00000533246 ADAM11O75078 769 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 F10P00742 488 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 HOXB1P14653 301 aaPredicted RBP11.29□□□□□ -0.6
BDNF-218ENST00000533246 RAB11BQ15907 218 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 FBXO42Q6P3S6 717 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 TSSK2Q96PF2 358 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 INTS14Q96SY0 518 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 CDCA3Q99618 268 aaPredicted RBP11.29□□□□□ -0.6
BDNF-218ENST00000533246 NPAS1Q99742 590 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.29□□□□□ -0.6
BDNF-218ENST00000533246 OR10A5Q9H207 317 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 ELOVL3Q9HB03 270 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 CUTCQ9NTM9 273 aa11.29□□□□□ -0.6
BDNF-218ENST00000533246 ABI3Q9P2A4 366 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms