RNA–Protein interactions for RNA: ENST00000531885.5

CMTM1-215, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-215ENST00000531885 GSG1Q2KHT4 349 aa9.96□□□□□ -0.82
CMTM1-215ENST00000531885 CEACAM16Q2WEN9 425 aa9.96□□□□□ -0.82
CMTM1-215ENST00000531885 SPANXN4Q5MJ08 99 aa9.96□□□□□ -0.82
CMTM1-215ENST00000531885 ATG16L1Q676U5 607 aa9.96□□□□□ -0.82
CMTM1-215ENST00000531885 ZNF621Q6ZSS3 439 aa9.96□□□□□ -0.82
CMTM1-215ENST00000531885 LINGO2Q7L985 606 aa9.96□□□□□ -0.82
CMTM1-215ENST00000531885 TREML1Q86YW5 311 aa9.96□□□□□ -0.82
CMTM1-215ENST00000531885 LRRC34Q8IZ02 419 aa9.96□□□□□ -0.82
CMTM1-215ENST00000531885 BPIFB2Q8N4F0 458 aa9.96□□□□□ -0.82
CMTM1-215ENST00000531885 OR4M2Q8NGB6 313 aa9.96□□□□□ -0.82
CMTM1-215ENST00000531885 OR52P1PQ8NH57 321 aa9.96□□□□□ -0.82
CMTM1-215ENST00000531885 MFSD8Q8NHS3 518 aa9.96□□□□□ -0.82
CMTM1-215ENST00000531885 RAB39BQ96DA2 213 aa9.96□□□□□ -0.82
CMTM1-215ENST00000531885 CCDC115Q96NT0 180 aa9.96□□□□□ -0.82
CMTM1-215ENST00000531885 ZBTB18Q99592 522 aa9.96□□□□□ -0.82
CMTM1-215ENST00000531885 NELFAQ9H3P2 528 aa9.96□□□□□ -0.82
CMTM1-215ENST00000531885 GPR35Q9HC97 309 aa9.96□□□□□ -0.82
CMTM1-215ENST00000531885 RLIMQ9NVW2 624 aa9.96□□□□□ -0.82
CMTM1-215ENST00000531885 RPS6KB2Q9UBS0 482 aa9.96□□□□□ -0.82
CMTM1-215ENST00000531885 BTNL2Q9UIR0 455 aa9.96□□□□□ -0.82
CMTM1-215ENST00000531885 FBXL3Q9UKT7 428 aa9.96□□□□□ -0.82
CMTM1-215ENST00000531885 PRAMEF27A3QJZ7 478 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 OR2T1O43869 369 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 SPAG7O75391 227 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 RAB36O95755 333 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 GSNP06396 782 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 PNMTP11086 282 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 TCN1P20061 433 aaPredicted RBP9.95□□□□□ -0.82
CMTM1-215ENST00000531885 GLRXP35754 106 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 P2RY4P51582 365 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 CRISP3P54108 245 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 MRPS11P82912 194 aaKnown RBP9.95□□□□□ -0.82
CMTM1-215ENST00000531885 IFFO1Q0D2I5 559 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 NKPD1Q17RQ9 610 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 GLIPR1L2Q4G1C9 344 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 ELFN2Q5R3F8 820 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 RNF220Q5VTB9 566 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 C5orf46Q6UWT4 87 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 NUDCD3Q8IVD9 361 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 EIF1ADQ8N9N8 165 aaKnown RBP9.95□□□□□ -0.82
CMTM1-215ENST00000531885 KIF18AQ8NI77 898 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 TCP10LQ8TDR4 215 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 OXGR1Q96P68 337 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 SYT3Q9BQG1 590 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 MRPL37Q9BZE1 423 aaKnown RBP9.95□□□□□ -0.82
CMTM1-215ENST00000531885 DENND2DQ9H6A0 471 aaPredicted RBP9.95□□□□□ -0.82
CMTM1-215ENST00000531885 ZNF385DQ9H6B1 395 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 DDX28Q9NUL7 540 aaKnown RBP9.95□□□□□ -0.82
CMTM1-215ENST00000531885 TREM2Q9NZC2 230 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 SLC17A7Q9P2U7 560 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 DUSP13Q9UII6 198 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 ZNF443Q9Y2A4 671 aaPredicted RBP9.95□□□□□ -0.82
CMTM1-215ENST00000531885 POFUT2Q9Y2G5 429 aa9.95□□□□□ -0.82
CMTM1-215ENST00000531885 TMEM229AB2RXF0 380 aa9.94□□□□□ -0.82
CMTM1-215ENST00000531885 ENTPD5O75356 428 aa9.94□□□□□ -0.82
CMTM1-215ENST00000531885 HPXP02790 462 aa9.94□□□□□ -0.82
CMTM1-215ENST00000531885 BPGMP07738 259 aa9.94□□□□□ -0.82
CMTM1-215ENST00000531885 NQO1P15559 274 aaKnown RBP9.94□□□□□ -0.82
CMTM1-215ENST00000531885 LBPP18428 481 aa9.94□□□□□ -0.82
CMTM1-215ENST00000531885 FPR2P25090 351 aa9.94□□□□□ -0.82
CMTM1-215ENST00000531885 ALDH3B1P43353 468 aa9.94□□□□□ -0.82
CMTM1-215ENST00000531885 RPS5P46782 204 aaKnown RBP9.94□□□□□ -0.82
CMTM1-215ENST00000531885 TEKQ02763 1124 aa9.94□□□□□ -0.82
CMTM1-215ENST00000531885 MMEL1Q495T6 779 aa9.94□□□□□ -0.82
CMTM1-215ENST00000531885 ACSM5Q6NUN0 579 aa9.94□□□□□ -0.82
CMTM1-215ENST00000531885 RBMS3Q6XE24 437 aaKnown RBP9.94□□□□□ -0.82
CMTM1-215ENST00000531885 ZNF813Q6ZN06 617 aa9.94□□□□□ -0.82
CMTM1-215ENST00000531885 ZNF836Q6ZNA1 936 aa9.94□□□□□ -0.82
CMTM1-215ENST00000531885 MYPOPQ86VE0 399 aaPredicted RBP9.94□□□□□ -0.82
CMTM1-215ENST00000531885 VRK2Q86Y07 508 aa9.94□□□□□ -0.82
CMTM1-215ENST00000531885 UEVLDQ8IX04 471 aa9.94□□□□□ -0.82
CMTM1-215ENST00000531885 KDM8Q8N371 416 aa9.94□□□□□ -0.82
CMTM1-215ENST00000531885 NANPQ8TBE9 248 aa9.94□□□□□ -0.82
CMTM1-215ENST00000531885 PNPT1Q8TCS8 783 aaKnown RBP9.94□□□□□ -0.82
CMTM1-215ENST00000531885 SNX33Q8WV41 574 aa9.94□□□□□ -0.82
CMTM1-215ENST00000531885 OR52E6Q96RD3 313 aa9.94□□□□□ -0.82
CMTM1-215ENST00000531885 ZNF275Q9NSD4 429 aaPredicted RBP9.94□□□□□ -0.82
CMTM1-215ENST00000531885 THUMPD1Q9NXG2 353 aaKnown RBP9.94□□□□□ -0.82
CMTM1-215ENST00000531885 SELENONQ9NZV5 590 aa9.94□□□□□ -0.82
CMTM1-215ENST00000531885 IFT52Q9Y366 437 aa9.94□□□□□ -0.82
CMTM1-215ENST00000531885 PKD1L1Q8TDX9 2849 aa9.93□□□□□ -0.82
CMTM1-215ENST00000531885 LOC105371242A0A075B767 164 aa9.93□□□□□ -0.82
CMTM1-215ENST00000531885 J3QLI3 93 aa9.93□□□□□ -0.82
CMTM1-215ENST00000531885 M0R3G1 203 aa9.93□□□□□ -0.82
CMTM1-215ENST00000531885 RFXANKO14593 260 aa9.93□□□□□ -0.82
CMTM1-215ENST00000531885 KCNAB3O43448 404 aa9.93□□□□□ -0.82
CMTM1-215ENST00000531885 NPIPB7O75200 414 aa9.93□□□□□ -0.82
CMTM1-215ENST00000531885 SEC14L2O76054 403 aa9.93□□□□□ -0.82
CMTM1-215ENST00000531885 UBL3O95164 117 aa9.93□□□□□ -0.82
CMTM1-215ENST00000531885 MPZL1O95297 269 aa9.93□□□□□ -0.82
CMTM1-215ENST00000531885 ANP32DO95626 131 aa9.93□□□□□ -0.82
CMTM1-215ENST00000531885 HLA-HP01893 362 aa9.93□□□□□ -0.82
CMTM1-215ENST00000531885 MT-ND5P03915 603 aa9.93□□□□□ -0.82
CMTM1-215ENST00000531885 COL8A2P25067 703 aa9.93□□□□□ -0.82
CMTM1-215ENST00000531885 CRATP43155 626 aa9.93□□□□□ -0.82
CMTM1-215ENST00000531885 PTDSS1P48651 473 aaKnown RBP9.93□□□□□ -0.82
CMTM1-215ENST00000531885 ARFIP2P53365 341 aa9.93□□□□□ -0.82
CMTM1-215ENST00000531885 FOXL1Q12952 345 aa9.93□□□□□ -0.82
CMTM1-215ENST00000531885 CAMK2DQ13557 499 aa9.93□□□□□ -0.82
CMTM1-215ENST00000531885 MFSD13AQ14CX5 517 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms