RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 UQCRC1P31930 480 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 IFNGR2P38484 337 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 GK3PQ14409 553 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 MS4A18Q3C1V0 323 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 ANKDD1AQ495B1 522 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 ZNF474Q6S9Z5 364 aaPredicted RBP13.56□□□□□ -0.24
CCS-206ENST00000530961 TBPL2Q6SJ96 375 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 TFAP2EQ6VUC0 442 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 TMPRSS11FQ6ZWK6 438 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 ZGRF1Q86YA3 2104 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 EPHX4Q8IUS5 362 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 UEVLDQ8IX04 471 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 ZNF100Q8IYN0 542 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 KDM8Q8N371 416 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 LRRC17Q8N6Y2 441 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 ZIC4Q8N9L1 334 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 OR52J3Q8NH60 311 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 APH1AQ96BI3 265 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 ALPK1Q96QP1 1244 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 FUZQ9BT04 418 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 CCM2LQ9NUG4 571 aaPredicted RBP13.56□□□□□ -0.24
CCS-206ENST00000530961 TMCC3Q9ULS5 477 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 NOX1Q9Y5S8 564 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 TRBV4-1A0A0J9YWV2 114 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 SH3PXD2BA1X283 911 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 OR6C65A6NJZ3 312 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 HNRNPRO43390 633 aaKnown RBP13.55□□□□□ -0.24
CCS-206ENST00000530961 ADORA3P0DMS8 318 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 AHCYP23526 432 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 NTF4P34130 210 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 SLC9A3P48764 834 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 LSM11P83369 360 aaKnown RBP eCLIP13.55□□□□□ -0.24
CCS-206ENST00000530961 SORDQ00796 357 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 IL1RL1Q01638 556 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 SP5Q6BEB4 398 aaPredicted RBP13.55□□□□□ -0.24
CCS-206ENST00000530961 OR2T5Q6IEZ7 315 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 AAED1Q7RTV5 226 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 NANOGNBQ7Z5D8 188 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 LINC00471Q8N535 108 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 PAPD5Q8NDF8 572 aaKnown RBP13.55□□□□□ -0.24
CCS-206ENST00000530961 ANKK1Q8NFD2 765 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 OR4K5Q8NGD3 323 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 OR2T29Q8NH02 315 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 ZNF385AQ96PM9 386 aaKnown RBP13.55□□□□□ -0.24
CCS-206ENST00000530961 SPOCK3Q9BQ16 436 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 ENKD1Q9H0I2 346 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 SLC24A3Q9HC58 644 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 NPDC1Q9NQX5 325 aaPredicted RBP13.55□□□□□ -0.24
CCS-206ENST00000530961 GALNT8Q9NY28 637 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 TAS2R5Q9NYW4 299 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 RCE1Q9Y256 329 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 MED12Q93074 2177 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 MED13LQ71F56 2210 aa13.55□□□□□ -0.24
CCS-206ENST00000530961 EFCAB9A8MZ26 197 aa13.54□□□□□ -0.24
CCS-206ENST00000530961 BLOC1S5-TXNDC5H3BN57 136 aa13.54□□□□□ -0.24
CCS-206ENST00000530961 TNFRSF11BO00300 401 aa13.54□□□□□ -0.24
CCS-206ENST00000530961 AKAP8O43823 692 aaKnown RBP13.54□□□□□ -0.24
CCS-206ENST00000530961 PIP5K1CO60331 668 aa13.54□□□□□ -0.24
CCS-206ENST00000530961 HPRP00739 348 aa13.54□□□□□ -0.24
CCS-206ENST00000530961 TSPAN19P0C672 248 aa13.54□□□□□ -0.24
CCS-206ENST00000530961 SAGP10523 405 aaPredicted RBP13.54□□□□□ -0.24
CCS-206ENST00000530961 POU2F1P14859 743 aa13.54□□□□□ -0.24
CCS-206ENST00000530961 CD79BP40259 229 aa13.54□□□□□ -0.24
CCS-206ENST00000530961 P2RY6Q15077 328 aa13.54□□□□□ -0.24
CCS-206ENST00000530961 SEC23BQ15437 767 aa13.54□□□□□ -0.24
CCS-206ENST00000530961 FBXW9Q5XUX1 488 aa13.54□□□□□ -0.24
CCS-206ENST00000530961 CASP12Q6UXS9 341 aa13.54□□□□□ -0.24
CCS-206ENST00000530961 Q6ZT83 130 aa13.54□□□□□ -0.24
CCS-206ENST00000530961 ACBD4Q8NC06 268 aa13.54□□□□□ -0.24
CCS-206ENST00000530961 UTP4Q969X6 686 aaKnown RBP13.54□□□□□ -0.24
CCS-206ENST00000530961 MARVELD3Q96A59 401 aa13.54□□□□□ -0.24
CCS-206ENST00000530961 RSRC1Q96IZ7 334 aaKnown RBP13.54□□□□□ -0.24
CCS-206ENST00000530961 HDHD5Q9BXW7 423 aa13.54□□□□□ -0.24
CCS-206ENST00000530961 REEP1Q9H902 201 aa13.54□□□□□ -0.24
CCS-206ENST00000530961 LYVE1Q9Y5Y7 322 aa13.54□□□□□ -0.24
CCS-206ENST00000530961 NIPBLQ6KC79 2804 aaeCLIP13.54□□□□□ -0.24
CCS-206ENST00000530961 ANKHD1Q8IWZ3 2542 aaKnown RBP13.54□□□□□ -0.24
CCS-206ENST00000530961 C19orf84I3L1E1 186 aa13.53□□□□□ -0.24
CCS-206ENST00000530961 RNF13O43567 381 aa13.53□□□□□ -0.24
CCS-206ENST00000530961 TRAF3IP2O43734 574 aaPredicted RBP13.53□□□□□ -0.24
CCS-206ENST00000530961 CST1P01037 141 aa13.53□□□□□ -0.24
CCS-206ENST00000530961 IGFBP2P18065 325 aa13.53□□□□□ -0.24
CCS-206ENST00000530961 MAKP20794 623 aa13.53□□□□□ -0.24
CCS-206ENST00000530961 OMPP47874 163 aa13.53□□□□□ -0.24
CCS-206ENST00000530961 LIMS1P48059 325 aa13.53□□□□□ -0.24
CCS-206ENST00000530961 CLDN17P56750 224 aa13.53□□□□□ -0.24
CCS-206ENST00000530961 FAM27E3Q08E93 113 aa13.53□□□□□ -0.24
CCS-206ENST00000530961 TAF11Q15544 211 aa13.53□□□□□ -0.24
CCS-206ENST00000530961 EXOC3L2Q2M3D2 409 aa13.53□□□□□ -0.24
CCS-206ENST00000530961 NHLRC1Q6VVB1 395 aa13.53□□□□□ -0.24
CCS-206ENST00000530961 OAFQ86UD1 273 aa13.53□□□□□ -0.24
CCS-206ENST00000530961 GABRG1Q8N1C3 465 aa13.53□□□□□ -0.24
CCS-206ENST00000530961 POMGNT2Q8NAT1 580 aa13.53□□□□□ -0.24
CCS-206ENST00000530961 RAB3IPQ96QF0 476 aaPredicted RBP13.53□□□□□ -0.24
CCS-206ENST00000530961 USB1Q9BQ65 265 aaKnown RBP13.53□□□□□ -0.24
CCS-206ENST00000530961 HIF3AQ9Y2N7 669 aa13.53□□□□□ -0.24
CCS-206ENST00000530961 SAMHD1Q9Y3Z3 626 aaKnown RBP13.53□□□□□ -0.24
CCS-206ENST00000530961 ZNF726A6NNF4 738 aa13.52□□□□□ -0.25
CCS-206ENST00000530961 C11orf98E9PRG8 122 aa13.52□□□□□ -0.25
CCS-206ENST00000530961 C16orf97H3BN30 126 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms