RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 GSDMAQ96QA5 445 aa4.82□□□□□ -1.64
CAPRIN1-208ENST00000530008 HIST1H4GQ99525 98 aa4.82□□□□□ -1.64
CAPRIN1-208ENST00000530008 ZNF184Q99676 751 aaPredicted RBP4.82□□□□□ -1.64
CAPRIN1-208ENST00000530008 SH3GL1Q99961 368 aa4.82□□□□□ -1.64
CAPRIN1-208ENST00000530008 KRTAP17-1Q9BYP8 105 aa4.82□□□□□ -1.64
CAPRIN1-208ENST00000530008 ELOVL6Q9H5J4 265 aa4.82□□□□□ -1.64
CAPRIN1-208ENST00000530008 GPATCH2LQ9NWQ4 482 aa4.82□□□□□ -1.64
CAPRIN1-208ENST00000530008 TREM2Q9NZC2 230 aa4.82□□□□□ -1.64
CAPRIN1-208ENST00000530008 AHSPQ9NZD4 102 aa4.82□□□□□ -1.64
CAPRIN1-208ENST00000530008 PAK5Q9P286 719 aa4.82□□□□□ -1.64
CAPRIN1-208ENST00000530008 PEF1Q9UBV8 284 aaKnown RBP4.82□□□□□ -1.64
CAPRIN1-208ENST00000530008 TRAF3IP3Q9Y228 551 aa4.82□□□□□ -1.64
CAPRIN1-208ENST00000530008 A6NIZ1 184 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 FAM25EA8MYX2 175 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 PPP1R2P9O14990 202 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 CHST1O43916 411 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 IGHV2-5P01817 119 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 EIF2S2P20042 333 aaKnown RBP4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 CXCR2P25025 360 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 KIR2DS4P43632 304 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 GPX6P59796 221 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 RAP1BP61224 184 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 PAX5Q02548 391 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 ZNF658Q5TYW1 1059 aaPredicted RBP4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 PLCXD3Q63HM9 321 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 REEP3Q6NUK4 255 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 C1orf94Q6P1W5 598 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 MOB1BQ7L9L4 216 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 PRSS41Q7RTY9 318 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 ZNF571Q7Z3V5 609 aaPredicted RBP4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 C6orf223Q8N319 242 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 CCDC71LQ8N9Z2 235 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 OR1S2Q8NGQ3 325 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 OR9A1PQ8NGU1 263 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 PIBF1Q8WXW3 757 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 SMARCD2Q92925 531 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 PRRC1Q96M27 445 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 PAXXQ9BUH6 204 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 ANKRD60Q9BZ19 345 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 GBA3Q9H227 469 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 NEUROG2Q9H2A3 272 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 UGT1A10Q9HAW8 530 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 LYRM4Q9HD34 91 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 CCNB1IP1Q9NPC3 277 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 ADAP2Q9NPF8 381 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 KCNIP1Q9NZI2 227 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 KIF25Q9UIL4 384 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 LSM7Q9UK45 103 aaKnown RBP4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 UGT2A1Q9Y4X1 527 aa4.81□□□□□ -1.64
CAPRIN1-208ENST00000530008 IGHV3OR16-13A0A075B7E8 117 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 SIRPB1O00241 398 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 SLC2A5P22732 501 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 TUBG1P23258 451 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 DCKP27707 260 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 HMOX2P30519 316 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 TFPI2P48307 235 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 SH3BGRP55822 239 aaPredicted RBP4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 ERVK-25P63136 954 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 IRF8Q02556 426 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 EGFEM1PQ0D2K5 195 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 DNAJC3Q13217 504 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 SELENBP1Q13228 472 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 ITIH4Q14624 930 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 ATAD3CQ5T2N8 411 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 ZNF546Q86UE3 836 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 ZNF589Q86UQ0 364 aaPredicted RBP4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 ZNF677Q86XU0 584 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 APOBEC3FQ8IUX4 373 aaKnown RBP4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 MMAAQ8IVH4 418 aaKnown RBP4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 MAPK1IP1LQ8NDC0 245 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 FBXL13Q8NEE6 735 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 OR10G3Q8NGC4 313 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 OR2G2Q8NGZ5 317 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 GPX8Q8TED1 209 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 NEIL2Q969S2 332 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 C8orf44Q96CB5 159 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 NAT9Q9BTE0 207 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 C20orf85Q9H1P6 137 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 BLZF1Q9H2G9 400 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 CYP3A43Q9HB55 503 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 FGF20Q9NP95 211 aaPredicted RBP4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 TUBG2Q9NRH3 451 aa4.8□□□□□ -1.64
CAPRIN1-208ENST00000530008 FANCIQ9NVI1 1328 aa4.79□□□□□ -1.64
CAPRIN1-208ENST00000530008 TCF20Q9UGU0 1960 aaKnown RBP4.79□□□□□ -1.64
CAPRIN1-208ENST00000530008 DYNC1I1O14576 645 aa4.79□□□□□ -1.64
CAPRIN1-208ENST00000530008 OTCP00480 354 aa4.79□□□□□ -1.64
CAPRIN1-208ENST00000530008 IGHV3-48P01763 117 aa4.79□□□□□ -1.64
CAPRIN1-208ENST00000530008 FGGP02679 453 aa4.79□□□□□ -1.64
CAPRIN1-208ENST00000530008 MYL2P10916 166 aa4.79□□□□□ -1.64
CAPRIN1-208ENST00000530008 MT3P25713 68 aa4.79□□□□□ -1.64
CAPRIN1-208ENST00000530008 BTDP43251 543 aa4.79□□□□□ -1.64
CAPRIN1-208ENST00000530008 SLC26A2P50443 739 aa4.79□□□□□ -1.64
CAPRIN1-208ENST00000530008 TMED1Q13445 227 aa4.79□□□□□ -1.64
CAPRIN1-208ENST00000530008 HSDL1Q3SXM5 330 aa4.79□□□□□ -1.64
CAPRIN1-208ENST00000530008 PRR30Q53SZ7 412 aaPredicted RBP4.79□□□□□ -1.64
CAPRIN1-208ENST00000530008 MARC1Q5VT66 337 aa4.79□□□□□ -1.64
CAPRIN1-208ENST00000530008 CERS6Q6ZMG9 384 aa4.79□□□□□ -1.64
CAPRIN1-208ENST00000530008 FAM220AQ7Z4H9 259 aa4.79□□□□□ -1.64
CAPRIN1-208ENST00000530008 PRR22Q8IZ63 422 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms