RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 FOXG1P55316 489 aaPredicted RBP11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 IL1RL1Q01638 556 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 PUDPQ08623 228 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 ZP4Q12836 540 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 TAB1Q15750 504 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 TIMM23BQ5SRD1 257 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 HIST3H2AQ7L7L0 130 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 SLC46A3Q7Z3Q1 461 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 PXKQ7Z7A4 578 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 P2RY8Q86VZ1 359 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 WFDC8Q8IUA0 241 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 UEVLDQ8IX04 471 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 OFCC1Q8IZS5 231 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 ARHGAP24Q8N264 748 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 PFN4Q8NHR9 129 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 HIST1H2ACQ93077 130 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 PIK3IP1Q96FE7 263 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 C7orf34Q96L11 122 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 MUS81Q96NY9 551 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 LINC00470Q9BZP3 86 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 MAN2C1Q9NTJ4 1040 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 C20orf141Q9NUB4 165 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 TAS2R5Q9NYW4 299 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 RHCGQ9UBD6 479 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 RCE1Q9Y256 329 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 MED31Q9Y3C7 131 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 NOX1Q9Y5S8 564 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 ENPP4Q9Y6X5 453 aa11.16□□□□□ -0.62
CCDC90B-216ENST00000529856 HRNRQ86YZ3 2850 aaPredicted RBP11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 A0A1W2PPR1 153 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 HTR3EA5X5Y0 456 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 OR5H1A6NKK0 313 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 ENO4A6NNW6 628 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 ARPC2O15144 300 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 AKAP8O43823 692 aaKnown RBP11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 SLC43A1O75387 559 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 UPK3AO75631 287 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 RAD51DO75771 328 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 KRT33AO76009 404 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 OR7A10O76100 309 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 OR6A2O95222 327 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 ADORA3P0DMS8 318 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 FUT1P19526 365 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 AHCYP23526 432 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 LGALS3BPQ08380 585 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 TRAM2Q15035 370 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 GABRA6Q16445 453 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 BEX5Q5H9J7 111 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 OR7E24Q6IFN5 339 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 SSX8Q7RTT4 187 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 ABHD12BQ7Z5M8 362 aaPredicted RBP11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 CYP4Z1Q86W10 505 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 FAM86B1Q8N7N1 296 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 C1orf162Q8NEQ5 155 aaPredicted RBP11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 LIPHQ8WWY8 451 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 NRGNQ92686 78 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 SGTBQ96EQ0 304 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 PYURFQ96I23 114 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 TXNDC15Q96J42 360 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 NSMCE2Q96MF7 247 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 OR2M2Q96R28 347 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 C1orf21Q9H246 121 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 PLEKHF2Q9H8W4 249 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 TAS2R1Q9NYW7 299 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 NDUFAF4Q9P032 175 aa11.15□□□□□ -0.62
CCDC90B-216ENST00000529856 ALPK2Q86TB3 2170 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 C11orf98E9PRG8 122 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 SEMG1P04279 462 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 UMPSP11172 480 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 RHCEP18577 417 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 LSM11P83369 360 aaKnown RBP eCLIP11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 POU3F1Q03052 451 aaPredicted RBP11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 TGFBR3Q03167 851 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 PPA1Q15181 289 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 STK11Q15831 433 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 IQCCQ4KMZ1 466 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 C9orf135Q5VTT2 229 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 ALKBH2Q6NS38 261 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 SEZ6L2Q6UXD5 910 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 LINGO2Q7L985 606 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 CDH24Q86UP0 819 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 RNF113BQ8IZP6 322 aaKnown RBP11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 TMEM123Q8N131 208 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 PIK3C3Q8NEB9 887 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 MUCL1Q96DR8 90 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 PLPPR2Q96GM1 343 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 BOD1Q96IK1 185 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 HS3ST6Q96QI5 342 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 LIME1Q9H400 295 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 NMNAT1Q9HAN9 279 aaPredicted RBP11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 NGBQ9NPG2 151 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 MED29Q9NX70 200 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 ACTR3BQ9P1U1 418 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 PRPF19Q9UMS4 504 aaKnown RBP11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 FAM32AQ9Y421 112 aaKnown RBP11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 SPG11Q96JI7 2443 aa11.14□□□□□ -0.63
CCDC90B-216ENST00000529856 CSMD2Q7Z408 3487 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 POLQO75417 2590 aa11.13□□□□□ -0.63
CCDC90B-216ENST00000529856 A0A087WUU8 490 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms