RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 IGKV3D-15A0A087WSY6 115 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 IGKV3D-11A0A0A0MRZ8 115 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 A0A1B0GU03 582 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 RTCAO00442 366 aaKnown RBP3.97□□□□□ -1.77
CSDE1-212ENST00000529046 CCL21O00585 134 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 HAT1O14929 419 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 TBX6O95947 436 aaPredicted RBP3.97□□□□□ -1.77
CSDE1-212ENST00000529046 FGGP02679 453 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 SLC35G6P0C7Q6 338 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 SMIM10L1P0DMW3 83 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 HTR1EP28566 365 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 DUTP33316 252 aaKnown RBP3.97□□□□□ -1.77
CSDE1-212ENST00000529046 HNF4AP41235 474 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 RGS4P49798 205 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 SMSP52788 366 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 EFNA3P52797 238 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 RIPPLY3P57055 190 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 KCNK10P57789 538 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 CSNK1G2P78368 415 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 CDKL1Q00532 357 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 SNX1Q13596 522 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 TMEM187Q14656 261 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 OPCMLQ14982 345 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 EFTUD2Q15029 972 aaKnown RBP eCLIP3.97□□□□□ -1.772e-10■□□□□ 9.1
CSDE1-212ENST00000529046 NSDHLQ15738 373 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 DUPD1Q68J44 220 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 ZNF470Q6ECI4 717 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 SLC25A25Q6KCM7 469 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 CAPN13Q6MZZ7 669 aaPredicted RBP3.97□□□□□ -1.77
CSDE1-212ENST00000529046 AGTRAPQ6RW13 159 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 ANKRD37Q7Z713 158 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 PRUNE1Q86TP1 453 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 C17orf64Q86WR6 236 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 SIAH3Q8IW03 269 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 NAT8LQ8N9F0 302 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 MFSD9Q8NBP5 474 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 SLC37A3Q8NCC5 494 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 OR7A2PQ8NGA2 310 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 NT5CQ8TCD5 201 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 CD200R1Q8TD46 325 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 SLCO2A1Q92959 643 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 SMIM10Q96HG1 83 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 SERPINB12Q96P63 405 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 UTP23Q9BRU9 249 aaKnown RBP3.97□□□□□ -1.77
CSDE1-212ENST00000529046 ACAT2Q9BWD1 397 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 ANKHQ9HCJ1 492 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 PPANQ9NQ55 473 aaKnown RBP3.97□□□□□ -1.77
CSDE1-212ENST00000529046 IARS2Q9NSE4 1012 aaKnown RBP3.97□□□□□ -1.77
CSDE1-212ENST00000529046 TAS2R13Q9NYV9 303 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 CIDEBQ9UHD4 219 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 PCYOX1Q9UHG3 505 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 FBXO5Q9UKT4 447 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 GUCA1BQ9UMX6 200 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 RUVBL2Q9Y230 463 aaKnown RBP3.97□□□□□ -1.77
CSDE1-212ENST00000529046 PDE10AQ9Y233 779 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 MEMO1Q9Y316 297 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 ADGRG4Q8IZF6 3080 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 DCHS2Q6V1P9 2916 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 CCDC88CQ9P219 2028 aa3.97□□□□□ -1.77
CSDE1-212ENST00000529046 CACNA1DQ01668 2161 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 TRAV34A0A0B4J273 112 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 TRGV8A0A0C4DH27 118 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 A0A1W2PPW3 197 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 A0A1W2PR80 420 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 KRT87PA6NCN2 255 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 SNURFLB1AK76 121 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 GOLGA8KD6RF30 607 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 GOLGA8TH3BQL2 631 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 KLRC4-KLRK1H3BQV0 150 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 P2RX6O15547 441 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 LCMT2O60294 686 aaKnown RBP3.96□□□□□ -1.78
CSDE1-212ENST00000529046 NME2P1O60361 137 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 GALR3O60755 368 aaPredicted RBP3.96□□□□□ -1.78
CSDE1-212ENST00000529046 SNRNP200O75643 2136 aaKnown RBP3.96□□□□□ -1.78
CSDE1-212ENST00000529046 GOSR1O95249 250 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 SLU7O95391 586 aaKnown RBP3.96□□□□□ -1.78
CSDE1-212ENST00000529046 TSPAN12O95859 305 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 KRT14P02533 472 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 FHP07954 510 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 SERPINA6P08185 405 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 HIST1H2AGP0C0S8 130 aaPredicted RBP3.96□□□□□ -1.78
CSDE1-212ENST00000529046 COX6B1P14854 86 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 HPDP32754 393 aaPredicted RBP3.96□□□□□ -1.78
CSDE1-212ENST00000529046 COILP38432 576 aaPredicted RBP3.96□□□□□ -1.78
CSDE1-212ENST00000529046 SLC1A2P43004 574 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 XCR1P46094 333 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 OR3A2P47893 321 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 KCNJ1P48048 391 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 FNTAP49354 379 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 CYB561P49447 251 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 HNMTP50135 292 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 HLCSP50747 726 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 CCR8P51685 355 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 SLC26A5P58743 744 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 TBPL1P62380 186 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 ZNF33BQ06732 778 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 ABRAXAS2Q15018 415 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 OR1C1Q15619 314 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 KRTAP21-3Q3LHN1 58 aa3.96□□□□□ -1.78
CSDE1-212ENST00000529046 SFT2D3Q587I9 215 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms