RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 SLC38A4Q969I6 547 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 MAL2Q969L2 176 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 CACNG6Q9BXT2 260 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 SLC52A3Q9NQ40 469 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 SLC25A37Q9NYZ2 338 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 PRPF19Q9UMS4 504 aaKnown RBP12.42□□□□□ -0.42
CAPN1-212ENST00000527887 ATP23Q9Y6H3 246 aa12.42□□□□□ -0.42
CAPN1-212ENST00000527887 TRBV5-3A0A0A0MS03 114 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 ARPC4-TTLL3A0A0A6YYG9 625 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 LOC100653049A0A140TA62 436 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 RPL36A-HNRNPH2H7BZ11 118 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 AIM2O14862 343 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 AKAP8O43823 692 aaKnown RBP12.41□□□□□ -0.42
CAPN1-212ENST00000527887 SSX4O60224 188 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 KRT34O76011 436 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 SELENOPP49908 381 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 NUDT6P53370 316 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 UBE2NP61088 152 aaKnown RBP12.41□□□□□ -0.42
CAPN1-212ENST00000527887 EGR4Q05215 589 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 NIPAL3Q6P499 406 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 ANKRD16Q6P6B7 361 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 CLEC2AQ6UVW9 174 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 MSRB3Q8IXL7 192 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 CCDC36Q8IYA8 594 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 ADPRHL1Q8NDY3 354 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 OR10H5Q8NGA6 315 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 OR1K1Q8NGR3 316 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 NFKBIDQ8NI38 313 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 SLC25A36Q96CQ1 311 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 SLC47A1Q96FL8 570 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 OXGR1Q96P68 337 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 EPYCQ99645 322 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 PTDSS2Q9BVG9 487 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 C1QTNF6Q9BXI9 259 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 SELENONQ9NZV5 590 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 VAPAQ9P0L0 249 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 TESQ9UGI8 421 aaKnown RBP12.41□□□□□ -0.42
CAPN1-212ENST00000527887 GDF2Q9UK05 429 aaPredicted RBP12.41□□□□□ -0.42
CAPN1-212ENST00000527887 FBXO9Q9UK97 447 aaPredicted RBP12.41□□□□□ -0.42
CAPN1-212ENST00000527887 SLC13A4Q9UKG4 626 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 CORINQ9Y5Q5 1042 aa12.41□□□□□ -0.42
CAPN1-212ENST00000527887 TRAV36DV7A0A075B6V5 113 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 A0A1B0GWA3 101 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 NR5A2O00482 541 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 CD5LO43866 347 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 NDUFS7O75251 213 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 SLC43A1O75387 559 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 CRLF1O75462 422 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 CSF3P09919 207 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 RPS5P46782 204 aaKnown RBP12.4□□□□□ -0.42
CAPN1-212ENST00000527887 MXRA7P84157 204 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 KRTAP1-1Q07627 177 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 SPOCK1Q08629 439 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 RBBP4Q09028 425 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 TBRG1Q3YBR2 411 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 ALG10BQ5I7T1 473 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 PAGE3Q5JUK9 113 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 SWT1Q5T5J6 900 aaKnown RBP12.4□□□□□ -0.42
CAPN1-212ENST00000527887 HMBOX1Q6NT76 420 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 B3GLCTQ6Y288 498 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 RINLQ6ZS11 566 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 H1FNTQ75WM6 255 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-212ENST00000527887 HIPK4Q8NE63 616 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 BCL2L2Q92843 193 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-212ENST00000527887 MCUR1Q96AQ8 359 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 KTI12Q96EK9 354 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-212ENST00000527887 SLC38A2Q96QD8 506 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 HOPXQ9BPY8 73 aaPredicted RBP12.4□□□□□ -0.42
CAPN1-212ENST00000527887 KCNS3Q9BQ31 491 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 KATNB1Q9BVA0 655 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 TMEM27Q9HBJ8 222 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 GID8Q9NWU2 228 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 SLAMF8Q9P0V8 285 aa12.4□□□□□ -0.42
CAPN1-212ENST00000527887 ZNF432O94892 652 aa12.39□□□□□ -0.43
CAPN1-212ENST00000527887 LGI1O95970 557 aa12.39□□□□□ -0.43
CAPN1-212ENST00000527887 CRYAAP02489 173 aa12.39□□□□□ -0.43
CAPN1-212ENST00000527887 SLC25A16P16260 332 aa12.39□□□□□ -0.43
CAPN1-212ENST00000527887 CDH2P19022 906 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-212ENST00000527887 EFNA4P52798 201 aa12.39□□□□□ -0.43
CAPN1-212ENST00000527887 SLC25A3Q00325 362 aa12.39□□□□□ -0.43
CAPN1-212ENST00000527887 HOXC5Q00444 222 aa12.39□□□□□ -0.43
CAPN1-212ENST00000527887 C1DQ13901 141 aaKnown RBP12.39□□□□□ -0.43
CAPN1-212ENST00000527887 SCARB2Q14108 478 aa12.39□□□□□ -0.43
CAPN1-212ENST00000527887 MMEL1Q495T6 779 aa12.39□□□□□ -0.43
CAPN1-212ENST00000527887 HIKESHIQ53FT3 197 aa12.39□□□□□ -0.43
CAPN1-212ENST00000527887 PGAM4Q8N0Y7 254 aa12.39□□□□□ -0.43
CAPN1-212ENST00000527887 DPP10Q8N608 796 aa12.39□□□□□ -0.43
CAPN1-212ENST00000527887 POU5F2Q8N7G0 328 aa12.39□□□□□ -0.43
CAPN1-212ENST00000527887 SCAIQ8N9R8 606 aa12.39□□□□□ -0.43
CAPN1-212ENST00000527887 PIK3C3Q8NEB9 887 aa12.39□□□□□ -0.43
CAPN1-212ENST00000527887 CADM1Q9BY67 442 aaKnown RBP12.39□□□□□ -0.43
CAPN1-212ENST00000527887 RASSF4Q9H2L5 321 aa12.39□□□□□ -0.43
CAPN1-212ENST00000527887 CRNNQ9UBG3 495 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-212ENST00000527887 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-212ENST00000527887 LEF1Q9UJU2 399 aaPredicted RBP12.39□□□□□ -0.43
CAPN1-212ENST00000527887 A0A087WUJ7 227 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 VSTM5A8MXK1 200 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 H0YHG0 523 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 ANGPT2O15123 496 aa12.38□□□□□ -0.43
CAPN1-212ENST00000527887 FMO6PO60774 539 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms