RNA–Protein interactions for RNA: ENST00000527027.1

PTPRU-210, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 3

Gene PTPRU, Length 619 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-210ENST00000527027 TPK1Q9H3S4 243 aa13.89□□□□□ -0.19
PTPRU-210ENST00000527027 MS4A5Q9H3V2 200 aa13.89□□□□□ -0.19
PTPRU-210ENST00000527027 ARMC7Q9H6L4 198 aa13.89□□□□□ -0.19
PTPRU-210ENST00000527027 METTL17Q9H7H0 456 aaPredicted RBP13.89□□□□□ -0.19
PTPRU-210ENST00000527027 MEAF6Q9HAF1 191 aa13.89□□□□□ -0.19
PTPRU-210ENST00000527027 AIG1Q9NVV5 245 aa13.89□□□□□ -0.19
PTPRU-210ENST00000527027 HAO1Q9UJM8 370 aa13.89□□□□□ -0.19
PTPRU-210ENST00000527027 USP22Q9UPT9 525 aa13.89□□□□□ -0.19
PTPRU-210ENST00000527027 CHST2Q9Y4C5 530 aa13.89□□□□□ -0.19
PTPRU-210ENST00000527027 MGAM2Q2M2H8 2515 aa13.88□□□□□ -0.19
PTPRU-210ENST00000527027 WIPF1O43516 503 aa13.88□□□□□ -0.19
PTPRU-210ENST00000527027 SYNGR3O43761 229 aa13.88□□□□□ -0.19
PTPRU-210ENST00000527027 ALDOCP09972 364 aaKnown RBP13.88□□□□□ -0.19
PTPRU-210ENST00000527027 ETFAP13804 333 aa13.88□□□□□ -0.19
PTPRU-210ENST00000527027 GTF2E2P29084 291 aaKnown RBP13.88□□□□□ -0.19
PTPRU-210ENST00000527027 RPS5P46782 204 aaKnown RBP13.88□□□□□ -0.19
PTPRU-210ENST00000527027 CAPZA2P47755 286 aa13.88□□□□□ -0.19
PTPRU-210ENST00000527027 MVDP53602 400 aa13.88□□□□□ -0.19
PTPRU-210ENST00000527027 EGR4Q05215 589 aa13.88□□□□□ -0.19
PTPRU-210ENST00000527027 ATG16L1Q676U5 607 aa13.88□□□□□ -0.19
PTPRU-210ENST00000527027 KRT80Q6KB66 452 aa13.88□□□□□ -0.19
PTPRU-210ENST00000527027 HDXQ7Z353 690 aa13.88□□□□□ -0.19
PTPRU-210ENST00000527027 SERPINA11Q86U17 422 aa13.88□□□□□ -0.19
PTPRU-210ENST00000527027 PIK3C3Q8NEB9 887 aa13.88□□□□□ -0.19
PTPRU-210ENST00000527027 SEMA6DQ8NFY4 1073 aa13.88□□□□□ -0.19
PTPRU-210ENST00000527027 SLC38A5Q8WUX1 472 aa13.88□□□□□ -0.19
PTPRU-210ENST00000527027 KTI12Q96EK9 354 aaPredicted RBP13.88□□□□□ -0.19
PTPRU-210ENST00000527027 HIF1ANQ9NWT6 349 aa13.88□□□□□ -0.19
PTPRU-210ENST00000527027 B3GNT2Q9NY97 397 aa13.88□□□□□ -0.19
PTPRU-210ENST00000527027 B3GAT1Q9P2W7 334 aa13.88□□□□□ -0.19
PTPRU-210ENST00000527027 REV1Q9UBZ9 1251 aa13.88□□□□□ -0.19
PTPRU-210ENST00000527027 SEC14L4Q9UDX3 406 aa13.88□□□□□ -0.19
PTPRU-210ENST00000527027 A0A0G2JPF8 293 aa13.87□□□□□ -0.19
PTPRU-210ENST00000527027 ZNF99A8MXY4 864 aaPredicted RBP13.87□□□□□ -0.19
PTPRU-210ENST00000527027 HNRNPCL2B2RXH8 293 aa13.87□□□□□ -0.19
PTPRU-210ENST00000527027 HNRNPCL3B7ZW38 293 aa13.87□□□□□ -0.19
PTPRU-210ENST00000527027 RFXANKO14593 260 aa13.87□□□□□ -0.19
PTPRU-210ENST00000527027 HNRNPCL1O60812 293 aaKnown RBP13.87□□□□□ -0.19
PTPRU-210ENST00000527027 BCHEP06276 602 aa13.87□□□□□ -0.19
PTPRU-210ENST00000527027 HNRNPCL4P0DMR1 293 aa13.87□□□□□ -0.19
PTPRU-210ENST00000527027 CRATP43155 626 aa13.87□□□□□ -0.19
PTPRU-210ENST00000527027 SLC9B1Q4ZJI4 515 aa13.87□□□□□ -0.19
PTPRU-210ENST00000527027 ELFN2Q5R3F8 820 aa13.87□□□□□ -0.19
PTPRU-210ENST00000527027 CLDND2Q8NHS1 167 aa13.87□□□□□ -0.19
PTPRU-210ENST00000527027 MRPL24Q96A35 216 aaKnown RBP13.87□□□□□ -0.19
PTPRU-210ENST00000527027 TMEM186Q96B77 213 aa13.87□□□□□ -0.19
PTPRU-210ENST00000527027 ZBTB18Q99592 522 aa13.87□□□□□ -0.19
PTPRU-210ENST00000527027 TMEM109Q9BVC6 243 aa13.87□□□□□ -0.19
PTPRU-210ENST00000527027 MRPL37Q9BZE1 423 aaKnown RBP13.87□□□□□ -0.19
PTPRU-210ENST00000527027 VIPAS39Q9H9C1 493 aa13.87□□□□□ -0.19
PTPRU-210ENST00000527027 SLC6A13Q9NSD5 602 aa13.87□□□□□ -0.19
PTPRU-210ENST00000527027 PNPOQ9NVS9 261 aa13.87□□□□□ -0.19
PTPRU-210ENST00000527027 IFT52Q9Y366 437 aa13.87□□□□□ -0.19
PTPRU-210ENST00000527027 SPEF1Q9Y4P9 236 aa13.87□□□□□ -0.19
PTPRU-210ENST00000527027 GPR45Q9Y5Y3 372 aa13.87□□□□□ -0.19
PTPRU-210ENST00000527027 LOC102725191A0A1B0GVB3 256 aa13.86□□□□□ -0.19
PTPRU-210ENST00000527027 M0R233 179 aa13.86□□□□□ -0.19
PTPRU-210ENST00000527027 DYNC1I1O14576 645 aa13.86□□□□□ -0.19
PTPRU-210ENST00000527027 AIM2O14862 343 aa13.86□□□□□ -0.19
PTPRU-210ENST00000527027 OR2T1O43869 369 aa13.86□□□□□ -0.19
PTPRU-210ENST00000527027 FZD7O75084 574 aa13.86□□□□□ -0.19
PTPRU-210ENST00000527027 SEC14L2O76054 403 aa13.86□□□□□ -0.19
PTPRU-210ENST00000527027 TCN1P20061 433 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-210ENST00000527027 COL8A2P25067 703 aa13.86□□□□□ -0.19
PTPRU-210ENST00000527027 GPR6P46095 362 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-210ENST00000527027 COMPP49747 757 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-210ENST00000527027 DSTNP60981 165 aa13.86□□□□□ -0.19
PTPRU-210ENST00000527027 SCGB2A2Q13296 93 aa13.86□□□□□ -0.19
PTPRU-210ENST00000527027 MSMPQ1L6U9 139 aa13.86□□□□□ -0.19
PTPRU-210ENST00000527027 H1FNTQ75WM6 255 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-210ENST00000527027 NET1Q7Z628 596 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-210ENST00000527027 CARM1Q86X55 608 aa13.86□□□□□ -0.19
PTPRU-210ENST00000527027 TMEM123Q8N131 208 aa13.86□□□□□ -0.19
PTPRU-210ENST00000527027 GLB1L3Q8NCI6 653 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-210ENST00000527027 ZNF418Q8TF45 676 aaPredicted RBP13.86□□□□□ -0.19
PTPRU-210ENST00000527027 RDH5Q92781 318 aa13.86□□□□□ -0.19
PTPRU-210ENST00000527027 TAAR8Q969N4 342 aa13.86□□□□□ -0.19
PTPRU-210ENST00000527027 OR2M2Q96R28 347 aa13.86□□□□□ -0.19
PTPRU-210ENST00000527027 RACGAP1Q9H0H5 632 aa13.86□□□□□ -0.19
PTPRU-210ENST00000527027 CACYBPQ9HB71 228 aaKnown RBP13.86□□□□□ -0.19
PTPRU-210ENST00000527027 GRIP1Q9Y3R0 1128 aa13.86□□□□□ -0.19
PTPRU-210ENST00000527027 TMEM247A6NEH6 219 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 FAM157AC9JC47 383 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 M0R082 166 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 M0R3G1 203 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 SDHDO14521 159 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 AKAP8O43823 692 aaKnown RBP13.85□□□□□ -0.19
PTPRU-210ENST00000527027 HLA-HP01893 362 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 HPXP02790 462 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 IL6P05231 212 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 MSMBP08118 114 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 ZCCHC18P0CG32 403 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 CD79AP11912 226 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 ZNF35P13682 527 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 ACHEP22303 614 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 GLRXP35754 106 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 TMEM33P57088 247 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 ACTG1P63261 375 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 HOXC5Q00444 222 aa13.85□□□□□ -0.19
PTPRU-210ENST00000527027 STX3Q13277 289 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms