RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 ARHGAP23Q9P227 1491 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 DIP2CQ9Y2E4 1556 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 IGHV1OR15-1A0A075B7D0 117 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 VSTM2BA6NLU5 285 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 C9JVG2 144 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 CACNG3O60359 315 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 TBL1XO60907 577 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 ZNF254O75437 659 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 LYPLA1O75608 230 aaPredicted RBP3.1□□□□□ -1.91
CD44-223ENST00000526553 CST1P01037 141 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 HSD17B2P37059 387 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 DDOSTP39656 456 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 YAP1P46937 504 aaKnown RBP3.1□□□□□ -1.91
CD44-223ENST00000526553 PLP1P60201 277 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 RPS14P62263 151 aaKnown RBP3.1□□□□□ -1.91
CD44-223ENST00000526553 GNB2P62879 340 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 TLE4Q04727 773 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 SCRN3Q0VDG4 424 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 OXA1LQ15070 435 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 KYAT1Q16773 422 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 DUSP7Q16829 419 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 DGUOKQ16854 277 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 BCL7AQ4VC05 210 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 OR52E8Q6IFG1 317 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 LRRC31Q6UY01 552 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 LRRC74BQ6ZQY2 392 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 ACOT7LQ6ZUV0 252 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 CENPQQ7L2Z9 268 aaPredicted RBP3.1□□□□□ -1.91
CD44-223ENST00000526553 PPP1R27Q86WC6 154 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 OR2L3Q8NG85 312 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 OR52H1Q8NGJ2 320 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 TSEN15Q8WW01 171 aaKnown RBP3.1□□□□□ -1.91
CD44-223ENST00000526553 ELSPBP1Q96BH3 223 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 HAVCR1Q96D42 359 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 SDHCQ99643 169 aaPredicted RBP3.1□□□□□ -1.91
CD44-223ENST00000526553 CENPKQ9BS16 269 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 SELENOIQ9C0D9 397 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 PPA2Q9H2U2 334 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 Q9H3A6 140 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 NARFLQ9H6Q4 476 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 PSMC3IPQ9P2W1 217 aaPredicted RBP3.1□□□□□ -1.91
CD44-223ENST00000526553 PISDQ9UG56 409 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 CHD4Q14839 1912 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 MROH2AA6NES4 1674 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 PLEKHH1Q9ULM0 1364 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 SETD1AO15047 1707 aaKnown RBP3.1□□□□□ -1.91
CD44-223ENST00000526553 CDC42BPBQ9Y5S2 1711 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 PLCH2O75038 1416 aa3.1□□□□□ -1.91
CD44-223ENST00000526553 ZNF518AQ6AHZ1 1483 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 KIF14Q15058 1648 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 MYO3AQ8NEV4 1616 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 ITSN2Q9NZM3 1697 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 SMCO3A2RU48 225 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 LRRIQ4A6NIV6 560 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 OR5B21A6NL26 309 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 LOC110117498-PIK3R3F6TDL0 507 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 H0YIV9 168 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 PANO1I0J062 215 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 DCTN6O00399 190 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 ABCD4O14678 606 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 HSD17B6O14756 317 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 EMC8O43402 210 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 RNF13O43567 381 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 OXSR1O95747 527 aaPredicted RBP3.09□□□□□ -1.91
CD44-223ENST00000526553 TMEM50AO95807 157 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 SEMG1P04279 462 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 HTR1FP30939 366 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 OTX1P32242 354 aaPredicted RBP3.09□□□□□ -1.91
CD44-223ENST00000526553 IFNA8P32881 189 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 VHLP40337 213 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 SYKP43405 635 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 TNNT2P45379 298 aaPredicted RBP3.09□□□□□ -1.91
CD44-223ENST00000526553 OR3A4PP47883 348 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 ZNF133P52736 654 aaPredicted RBP3.09□□□□□ -1.91
CD44-223ENST00000526553 PSG7Q13046 419 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 EIF4EBP2Q13542 120 aaPredicted RBP3.09□□□□□ -1.91
CD44-223ENST00000526553 OR5I1Q13606 314 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 GRB7Q14451 532 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 MICBQ29980 383 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 PARP15Q460N3 678 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 CARD16Q5EG05 197 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 KLF17Q5JT82 389 aaPredicted RBP3.09□□□□□ -1.91
CD44-223ENST00000526553 LRRC66Q68CR7 880 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 C11orf71Q6IPW1 123 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 CXCL17Q6UXB2 119 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 PGAP1Q75T13 922 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 BZW1Q7L1Q6 419 aaKnown RBP3.09□□□□□ -1.91
CD44-223ENST00000526553 BIVMQ86UB2 503 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 TGIF2LYQ8IUE0 185 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 ERI1Q8IV48 349 aaKnown RBP3.09□□□□□ -1.91
CD44-223ENST00000526553 CCDC71LQ8N9Z2 235 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 OR1L6Q8NGR2 347 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 PAGE5Q96GU1 130 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 PLEKHA8Q96JA3 519 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 ZNF285Q96NJ3 590 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 KCNA7Q96RP8 456 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 TBX15Q96SF7 602 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 FMO2Q99518 471 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 HIST1H4GQ99525 98 aa3.09□□□□□ -1.91
CD44-223ENST00000526553 GAL3ST1Q99999 423 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms