RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 SLC38A1Q9H2H9 487 aa2.54□□□□□ -2
TRAPPC4-207ENST00000526141 PPDPFQ9H3Y8 114 aa2.54□□□□□ -2
TRAPPC4-207ENST00000526141 C1orf198Q9H425 327 aa2.54□□□□□ -2
TRAPPC4-207ENST00000526141 RBKSQ9H477 322 aa2.54□□□□□ -2
TRAPPC4-207ENST00000526141 TUBB1Q9H4B7 451 aa2.54□□□□□ -2
TRAPPC4-207ENST00000526141 GAREM1Q9H706 876 aa2.54□□□□□ -2
TRAPPC4-207ENST00000526141 ATP13A3Q9H7F0 1226 aa2.54□□□□□ -2
TRAPPC4-207ENST00000526141 NT5DC2Q9H857 520 aa2.54□□□□□ -2
TRAPPC4-207ENST00000526141 FGF20Q9NP95 211 aaPredicted RBP2.54□□□□□ -2
TRAPPC4-207ENST00000526141 NECAP2Q9NVZ3 263 aa2.54□□□□□ -2
TRAPPC4-207ENST00000526141 TAS2R16Q9NYV7 291 aa2.54□□□□□ -2
TRAPPC4-207ENST00000526141 EHFQ9NZC4 300 aa2.54□□□□□ -2
TRAPPC4-207ENST00000526141 SENP1Q9P0U3 644 aa2.54□□□□□ -2
TRAPPC4-207ENST00000526141 ZNF282Q9UDV7 671 aaPredicted RBP2.54□□□□□ -2
TRAPPC4-207ENST00000526141 LNPEPQ9UIQ6 1025 aa2.54□□□□□ -2
TRAPPC4-207ENST00000526141 NAGKQ9UJ70 344 aa2.54□□□□□ -2
TRAPPC4-207ENST00000526141 SCML1Q9UN30 329 aa2.54□□□□□ -2
TRAPPC4-207ENST00000526141 ERVW-1Q9UQF0 538 aa2.54□□□□□ -2
TRAPPC4-207ENST00000526141 KCNIP3Q9Y2W7 256 aa2.54□□□□□ -2
TRAPPC4-207ENST00000526141 YARS2Q9Y2Z4 477 aaKnown RBP2.54□□□□□ -2
TRAPPC4-207ENST00000526141 MRPS18CQ9Y3D5 142 aaKnown RBP2.54□□□□□ -2
TRAPPC4-207ENST00000526141 HYOU1Q9Y4L1 999 aa2.54□□□□□ -2
TRAPPC4-207ENST00000526141 URGCP-MRPS24S4R325 110 aa2.54□□□□□ -2
TRAPPC4-207ENST00000526141 JCADQ9P266 1359 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 FABP12A6NFH5 140 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 MSGN1A6NI15 193 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 H7C0C1 242 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 GFYI3L273 518 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 FCN1O00602 326 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 SNAI2O43623 268 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 TYROBPO43914 113 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 CEACAM4O75871 244 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 ERLIN2O94905 339 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 BRI3O95415 125 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 CD160O95971 181 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 ATP1A1P05023 1023 aaKnown RBP2.53□□□□□ -2
TRAPPC4-207ENST00000526141 FGF1P05230 155 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 C2P06681 752 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 KRT16P08779 473 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 STSP08842 583 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 UBTFL1P0CB47 393 aaPredicted RBP2.53□□□□□ -2
TRAPPC4-207ENST00000526141 MGMTP16455 207 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 ZNF12P17014 697 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 CTRB1P17538 263 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 PGAM1P18669 254 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 SDC1P18827 310 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 IDSP22304 550 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 TEAD1P28347 426 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 EVI2BP34910 448 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 DDOSTP39656 456 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 LEPP41159 167 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 AQP2P41181 271 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 NBL1P41271 181 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 CDKN2AP42771 156 aaKnown RBP2.53□□□□□ -2
TRAPPC4-207ENST00000526141 TFPI2P48307 235 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 PCYT1AP49585 367 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 HNRNPA3P51991 378 aaKnown RBP2.53□□□□□ -2
TRAPPC4-207ENST00000526141 FBXW4P57775 412 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 GPX6P59796 221 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 PRPS1P60891 318 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 RPS15AP62244 130 aaKnown RBP2.53□□□□□ -2
TRAPPC4-207ENST00000526141 TUBA1BP68363 451 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 BASP1P80723 227 aaKnown RBP2.53□□□□□ -2
TRAPPC4-207ENST00000526141 LTBQ06643 244 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 ST3GAL3Q11203 375 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 CALCOCO2Q13137 446 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 OR5I1Q13606 314 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 FASTKQ14296 549 aaKnown RBP2.53□□□□□ -2
TRAPPC4-207ENST00000526141 OXA1LQ15070 435 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 PON2Q15165 354 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 OR4D1Q15615 310 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 TSC22D1Q15714 1073 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 TNXAQ16473 311 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 CYP51A1Q16850 503 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 ECSCRQ19T08 205 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 FAM120AOSQ5T036 256 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 CTRB2Q6GPI1 263 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 OR52E8Q6IFG1 317 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 EMBQ6PCB8 327 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 ZNF790Q6PG37 636 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 APOOLQ6UXV4 268 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 ZNF836Q6ZNA1 936 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 LINC00336Q6ZUF6 198 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 CHMP1BQ7LBR1 199 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 ASCL5Q7RTU5 278 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 C16orf82Q7Z2V1 217 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 NUFIP2Q7Z417 695 aaKnown RBP2.53□□□□□ -2
TRAPPC4-207ENST00000526141 ZNF546Q86UE3 836 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 ZBED8Q8IZ13 594 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 CMTM1Q8IZ96 169 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 LIX1Q8N485 282 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 METTL27Q8N6F8 245 aaPredicted RBP2.53□□□□□ -2
TRAPPC4-207ENST00000526141 OR2T33Q8NG76 320 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 OR5AP2Q8NGF4 316 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 OR1S2Q8NGQ3 325 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 OR2T11Q8NH01 316 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 OR5K2Q8NHB8 316 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 FNDC8Q8TC99 324 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 MAPK15Q8TD08 544 aa2.53□□□□□ -2
TRAPPC4-207ENST00000526141 GTF3AQ92664 365 aaKnown RBP2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms