RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 FAM156AQ8NDB6 213 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 MFSD8Q8NHS3 518 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 MPP4Q96JB8 637 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 NAA11Q9BSU3 229 aaPredicted RBP11.03□□□□□ -0.64
SMCO4-202ENST00000525141 TMEM43Q9BTV4 400 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 PRPF19Q9UMS4 504 aaKnown RBP11.03□□□□□ -0.64
SMCO4-202ENST00000525141 LAMP3Q9UQV4 416 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 NOSIPQ9Y314 301 aaKnown RBP11.03□□□□□ -0.64
SMCO4-202ENST00000525141 FLVCR1Q9Y5Y0 555 aa11.03□□□□□ -0.64
SMCO4-202ENST00000525141 HEATR1Q9H583 2144 aaKnown RBP11.03□□□□□ -0.64
SMCO4-202ENST00000525141 TLN2Q9Y4G6 2542 aa11.02□□□□□ -0.64
SMCO4-202ENST00000525141 OR5H1A6NKK0 313 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 CPSF4LA6NMK7 179 aaKnown RBP11.02□□□□□ -0.65
SMCO4-202ENST00000525141 SHISA9B4DS77 424 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 H7C1Q1 480 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 FZD7O75084 574 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 LYPD3O95274 346 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 AHSA1O95433 338 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 ZNF682O95780 498 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 CD3EP07766 207 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 ITGA5P08648 1049 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 TNFRSF1BP20333 461 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 LTBQ06643 244 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 GABRA6Q16445 453 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 ZNF672Q499Z4 452 aaPredicted RBP11.02□□□□□ -0.65
SMCO4-202ENST00000525141 IFI44LQ53G44 452 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 TIMM23BQ5SRD1 257 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 PAQR6Q6TCH4 344 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 FKBP9P1Q75LS8 142 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 OR6S1Q8NH40 331 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 GEMIN6Q8WXD5 167 aaKnown RBP11.02□□□□□ -0.65
SMCO4-202ENST00000525141 COX4I2Q96KJ9 171 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 EPYCQ99645 322 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 USB1Q9BQ65 265 aaKnown RBP11.02□□□□□ -0.65
SMCO4-202ENST00000525141 TAPBPLQ9BX59 468 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 SLC7A10Q9NS82 523 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 ACTR3BQ9P1U1 418 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 SAMD4AQ9UPU9 718 aaKnown RBP11.02□□□□□ -0.65
SMCO4-202ENST00000525141 RNF115Q9Y4L5 304 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 SNX13Q9Y5W8 968 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 SLC25A15Q9Y619 301 aa11.02□□□□□ -0.65
SMCO4-202ENST00000525141 NSD1Q96L73 2696 aaPredicted RBP11.02□□□□□ -0.65
SMCO4-202ENST00000525141 PLCE1Q9P212 2302 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 IGKV1D-42A0A075B6H8 117 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 TRAV36DV7A0A075B6V5 113 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 A0A1W2PR80 420 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 FTCDNL1E5RQL4 147 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 GPR171O14626 319 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 CLOCKO15516 846 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 MRPL33O75394 65 aaKnown RBP11.01□□□□□ -0.65
SMCO4-202ENST00000525141 ATP5HO75947 161 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 AKR7A3O95154 331 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 VAMP5O95183 116 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 OR5F1O95221 314 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 THY1P04216 161 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 IFNW1P05000 195 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 IFNA8P32881 189 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 MSX2P35548 267 aaPredicted RBP11.01□□□□□ -0.65
SMCO4-202ENST00000525141 FAPQ12884 760 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 BNIP1Q12981 228 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 TRIM25Q14258 630 aaKnown RBP11.01□□□□□ -0.65
SMCO4-202ENST00000525141 MFSD13AQ14CX5 517 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 PPA1Q15181 289 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 FAM69AQ5T7M9 428 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 TSPO2Q5TGU0 170 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 VTCN1Q7Z7D3 282 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 TSPYL5Q86VY4 417 aaPredicted RBP11.01□□□□□ -0.65
SMCO4-202ENST00000525141 P2RY8Q86VZ1 359 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 KBTBD8Q8NFY9 601 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 PIGXQ8TBF5 258 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 RNF217Q8TC41 542 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 SMAP2Q8WU79 429 aaPredicted RBP11.01□□□□□ -0.65
SMCO4-202ENST00000525141 TMEM171Q8WVE6 324 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 TAAR8Q969N4 342 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 APH1AQ96BI3 265 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 SLC7A6OSQ96CW6 309 aaPredicted RBP11.01□□□□□ -0.65
SMCO4-202ENST00000525141 KTI12Q96EK9 354 aaPredicted RBP11.01□□□□□ -0.65
SMCO4-202ENST00000525141 SLC41A3Q96GZ6 507 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 HSH2DQ96JZ2 352 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 ZNF385AQ96PM9 386 aaKnown RBP11.01□□□□□ -0.65
SMCO4-202ENST00000525141 ZNF426Q9BUY5 554 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 PTDSS2Q9BVG9 487 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 SLC19A3Q9BZV2 496 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 AMBRA1Q9C0C7 1298 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 MUC13Q9H3R2 512 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 ESRP2Q9H6T0 727 aaKnown RBP11.01□□□□□ -0.65
SMCO4-202ENST00000525141 RIMS3Q9UJD0 308 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 SLC7A7Q9UM01 511 aa11.01□□□□□ -0.65
SMCO4-202ENST00000525141 AQP7P3A6NL99 342 aa11□□□□□ -0.65
SMCO4-202ENST00000525141 SMAD7O15105 426 aaKnown RBP11□□□□□ -0.65
SMCO4-202ENST00000525141 ARPC2O15144 300 aa11□□□□□ -0.65
SMCO4-202ENST00000525141 GYG2O15488 501 aa11□□□□□ -0.65
SMCO4-202ENST00000525141 NDUFS7O75251 213 aa11□□□□□ -0.65
SMCO4-202ENST00000525141 RAD51DO75771 328 aa11□□□□□ -0.65
SMCO4-202ENST00000525141 PTNP21246 168 aa11□□□□□ -0.65
SMCO4-202ENST00000525141 RPS5P46782 204 aaKnown RBP11□□□□□ -0.65
SMCO4-202ENST00000525141 RASSF2P50749 326 aa11□□□□□ -0.65
SMCO4-202ENST00000525141 TAS2R41P59536 307 aa11□□□□□ -0.65
SMCO4-202ENST00000525141 ST3GAL3Q11203 375 aa11□□□□□ -0.65
SMCO4-202ENST00000525141 PIN1Q13526 163 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms