RNA–Protein interactions for RNA: ENST00000523896.1

PCM1-220, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 740 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-220ENST00000523896 QARSP47897 775 aaKnown RBP2.55□□□□□ -2
PCM1-220ENST00000523896 KPNA2P52292 529 aaKnown RBP2.55□□□□□ -2
PCM1-220ENST00000523896 ARFIP1P53367 373 aa2.55□□□□□ -2
PCM1-220ENST00000523896 PKNOX1P55347 436 aa2.55□□□□□ -2
PCM1-220ENST00000523896 SELENOTP62341 195 aa2.55□□□□□ -2
PCM1-220ENST00000523896 ZNF763Q0D2J5 394 aa2.55□□□□□ -2
PCM1-220ENST00000523896 IL24Q13007 206 aa2.55□□□□□ -2
PCM1-220ENST00000523896 CHIT1Q13231 466 aa2.55□□□□□ -2
PCM1-220ENST00000523896 VGLL4Q14135 290 aa2.55□□□□□ -2
PCM1-220ENST00000523896 LTBP1Q14766 1721 aa2.55□□□□□ -2
PCM1-220ENST00000523896 COL24A1Q17RW2 1714 aa2.55□□□□□ -2
PCM1-220ENST00000523896 ZNF630Q2M218 657 aaPredicted RBP2.55□□□□□ -2
PCM1-220ENST00000523896 PARP15Q460N3 678 aa2.55□□□□□ -2
PCM1-220ENST00000523896 LRRC23Q53EV4 343 aaPredicted RBP2.55□□□□□ -2
PCM1-220ENST00000523896 CARD16Q5EG05 197 aa2.55□□□□□ -2
PCM1-220ENST00000523896 C1orf100Q5SVJ3 147 aa2.55□□□□□ -2
PCM1-220ENST00000523896 OVOS2Q6IE36 1432 aa2.55□□□□□ -2
PCM1-220ENST00000523896 SETXQ7Z333 2677 aaKnown RBP2.55□□□□□ -2
PCM1-220ENST00000523896 C6orf223Q8N319 242 aa2.55□□□□□ -2
PCM1-220ENST00000523896 FTMTQ8N4E7 242 aa2.55□□□□□ -2
PCM1-220ENST00000523896 RNF175Q8N4F7 328 aa2.55□□□□□ -2
PCM1-220ENST00000523896 MFSD9Q8NBP5 474 aa2.55□□□□□ -2
PCM1-220ENST00000523896 OR10G3Q8NGC4 313 aa2.55□□□□□ -2
PCM1-220ENST00000523896 MAIP1Q8WWC4 291 aa2.55□□□□□ -2
PCM1-220ENST00000523896 PXDNQ92626 1479 aa2.55□□□□□ -2
PCM1-220ENST00000523896 UCN3Q969E3 161 aa2.55□□□□□ -2
PCM1-220ENST00000523896 SLC41A3Q96GZ6 507 aa2.55□□□□□ -2
PCM1-220ENST00000523896 RNF2Q99496 336 aa2.55□□□□□ -2
PCM1-220ENST00000523896 THSD7BQ9C0I4 1608 aa2.55□□□□□ -2
PCM1-220ENST00000523896 C20orf85Q9H1P6 137 aa2.55□□□□□ -2
PCM1-220ENST00000523896 REEP4Q9H6H4 257 aa2.55□□□□□ -2
PCM1-220ENST00000523896 SLC25A22Q9H936 323 aa2.55□□□□□ -2
PCM1-220ENST00000523896 NANOGQ9H9S0 305 aa2.55□□□□□ -2
PCM1-220ENST00000523896 PLGRKTQ9HBL7 147 aa2.55□□□□□ -2
PCM1-220ENST00000523896 MMP26Q9NRE1 261 aa2.55□□□□□ -2
PCM1-220ENST00000523896 TMCC3Q9ULS5 477 aa2.55□□□□□ -2
PCM1-220ENST00000523896 STAP1Q9ULZ2 295 aa2.55□□□□□ -2
PCM1-220ENST00000523896 RPL36Q9Y3U8 105 aaKnown RBP2.55□□□□□ -2
PCM1-220ENST00000523896 MKI67P46013 3256 aaKnown RBP2.55□□□□□ -2
PCM1-220ENST00000523896 COL14A1Q05707 1796 aaKnown RBP2.54□□□□□ -2
PCM1-220ENST00000523896 LRRIQ1Q96JM4 1722 aa2.54□□□□□ -2
PCM1-220ENST00000523896 PIK3C2AO00443 1686 aa2.54□□□□□ -2
PCM1-220ENST00000523896 LAMA2P24043 3122 aaKnown RBP2.54□□□□□ -2
PCM1-220ENST00000523896 LMTK2Q8IWU2 1503 aa2.54□□□□□ -2
PCM1-220ENST00000523896 TECPR2O15040 1411 aa2.54□□□□□ -2
PCM1-220ENST00000523896 A6NIZ1 184 aa2.54□□□□□ -2
PCM1-220ENST00000523896 HIP1O00291 1037 aa2.54□□□□□ -2
PCM1-220ENST00000523896 POLR2DO15514 142 aaKnown RBP2.54□□□□□ -2
PCM1-220ENST00000523896 UGT1A9O60656 530 aa2.54□□□□□ -2
PCM1-220ENST00000523896 RAMP3O60896 148 aa2.54□□□□□ -2
PCM1-220ENST00000523896 MTX2O75431 263 aa2.54□□□□□ -2
PCM1-220ENST00000523896 ATP5LO75964 103 aa2.54□□□□□ -2
PCM1-220ENST00000523896 NR2C1P13056 603 aa2.54□□□□□ -2
PCM1-220ENST00000523896 ZNF17P17021 662 aa2.54□□□□□ -2
PCM1-220ENST00000523896 ATP6V1B2P21281 511 aa2.54□□□□□ -2
PCM1-220ENST00000523896 PCMT1P22061 227 aa2.54□□□□□ -2
PCM1-220ENST00000523896 CCNE1P24864 410 aa2.54□□□□□ -2
PCM1-220ENST00000523896 PRDX3P30048 256 aaKnown RBP2.54□□□□□ -2
PCM1-220ENST00000523896 DUSP3P51452 185 aaPredicted RBP2.54□□□□□ -2
PCM1-220ENST00000523896 KRTAP10-8P60410 259 aa2.54□□□□□ -2
PCM1-220ENST00000523896 RAP1BP61224 184 aa2.54□□□□□ -2
PCM1-220ENST00000523896 BCL7AQ4VC05 210 aa2.54□□□□□ -2
PCM1-220ENST00000523896 SAMD4BQ5PRF9 694 aaKnown RBP2.54□□□□□ -2
PCM1-220ENST00000523896 OR2G6Q5TZ20 316 aa2.54□□□□□ -2
PCM1-220ENST00000523896 OR4F3Q6IEY1 312 aa2.54□□□□□ -2
PCM1-220ENST00000523896 OR52E8Q6IFG1 317 aa2.54□□□□□ -2
PCM1-220ENST00000523896 RNF165Q6ZSG1 346 aa2.54□□□□□ -2
PCM1-220ENST00000523896 RFLNAQ6ZTI6 216 aa2.54□□□□□ -2
PCM1-220ENST00000523896 DCAF4L2Q8NA75 395 aa2.54□□□□□ -2
PCM1-220ENST00000523896 SUMF2Q8NBJ7 301 aa2.54□□□□□ -2
PCM1-220ENST00000523896 TRPV1Q8NER1 839 aa2.54□□□□□ -2
PCM1-220ENST00000523896 OR4K14Q8NGD5 310 aa2.54□□□□□ -2
PCM1-220ENST00000523896 FBXO30Q8TB52 745 aa2.54□□□□□ -2
PCM1-220ENST00000523896 RNF138Q8WVD3 245 aa2.54□□□□□ -2
PCM1-220ENST00000523896 UBE2E3Q969T4 207 aa2.54□□□□□ -2
PCM1-220ENST00000523896 MTMR9Q96QG7 549 aa2.54□□□□□ -2
PCM1-220ENST00000523896 P2RY13Q9BPV8 354 aa2.54□□□□□ -2
PCM1-220ENST00000523896 TMEM43Q9BTV4 400 aa2.54□□□□□ -2
PCM1-220ENST00000523896 NT5C3AQ9H0P0 336 aa2.54□□□□□ -2
PCM1-220ENST00000523896 RBKSQ9H477 322 aa2.54□□□□□ -2
PCM1-220ENST00000523896 NHEJ1Q9H9Q4 299 aaPredicted RBP2.54□□□□□ -2
PCM1-220ENST00000523896 PTBP2Q9UKA9 531 aaKnown RBP2.54□□□□□ -2
PCM1-220ENST00000523896 MUC6Q6W4X9 2439 aa2.54□□□□□ -2
PCM1-220ENST00000523896 ANKRD11Q6UB99 2663 aaPredicted RBP2.54□□□□□ -2
PCM1-220ENST00000523896 LRRC37A3O60309 1634 aa2.53□□□□□ -2
PCM1-220ENST00000523896 SPTBN5Q9NRC6 3674 aaKnown RBP2.53□□□□□ -2
PCM1-220ENST00000523896 SSH2Q76I76 1423 aa2.53□□□□□ -2
PCM1-220ENST00000523896 RRBP1Q9P2E9 1410 aaKnown RBP2.53□□□□□ -2
PCM1-220ENST00000523896 PIK3R4Q99570 1358 aa2.53□□□□□ -2
PCM1-220ENST00000523896 RPAP1Q9BWH6 1393 aaPredicted RBP2.53□□□□□ -2
PCM1-220ENST00000523896 E9PBE3 544 aa2.53□□□□□ -2
PCM1-220ENST00000523896 LOC110117498-PIK3R3F6TDL0 507 aa2.53□□□□□ -2
PCM1-220ENST00000523896 KRTAP4-16G5E9R7 235 aaPredicted RBP2.53□□□□□ -2
PCM1-220ENST00000523896 MED7O43513 233 aa2.53□□□□□ -2
PCM1-220ENST00000523896 P04436 131 aa2.53□□□□□ -2
PCM1-220ENST00000523896 CXCR2P25025 360 aa2.53□□□□□ -2
PCM1-220ENST00000523896 HMGB2P26583 209 aaKnown RBP2.53□□□□□ -2
PCM1-220ENST00000523896 GNA11P29992 359 aa2.53□□□□□ -2
PCM1-220ENST00000523896 DDOSTP39656 456 aa2.53□□□□□ -2
PCM1-220ENST00000523896 CTRLP40313 264 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms