RNA–Protein interactions for RNA: ENST00000523540.1

PCM1-219, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-219ENST00000523540 CDK16Q00536 496 aa2.78□□□□□ -1.96
PCM1-219ENST00000523540 PDIA2Q13087 525 aaKnown RBP2.78□□□□□ -1.96
PCM1-219ENST00000523540 PDK3Q15120 406 aa2.78□□□□□ -1.96
PCM1-219ENST00000523540 PIGGQ5H8A4 983 aa2.78□□□□□ -1.96
PCM1-219ENST00000523540 CAMK2N1Q7Z7J9 78 aa2.78□□□□□ -1.96
PCM1-219ENST00000523540 DHDDSQ86SQ9 333 aa2.78□□□□□ -1.96
PCM1-219ENST00000523540 LINC01551Q86U37 167 aa2.78□□□□□ -1.96
PCM1-219ENST00000523540 ECHDC2Q86YB7 292 aa2.78□□□□□ -1.96
PCM1-219ENST00000523540 ACOT4Q8N9L9 421 aa2.78□□□□□ -1.96
PCM1-219ENST00000523540 OR5D13Q8NGL4 314 aa2.78□□□□□ -1.96
PCM1-219ENST00000523540 SCFD1Q8WVM8 642 aa2.78□□□□□ -1.96
PCM1-219ENST00000523540 TMEM43Q9BTV4 400 aa2.78□□□□□ -1.96
PCM1-219ENST00000523540 RANBP3Q9H6Z4 567 aaPredicted RBP2.78□□□□□ -1.96
PCM1-219ENST00000523540 PATZ1Q9HBE1 687 aaKnown RBP2.78□□□□□ -1.96
PCM1-219ENST00000523540 ZFP14Q9HCL3 533 aa2.78□□□□□ -1.96
PCM1-219ENST00000523540 POLE4Q9NR33 117 aa2.78□□□□□ -1.96
PCM1-219ENST00000523540 GLRX2Q9NS18 164 aa2.78□□□□□ -1.96
PCM1-219ENST00000523540 GNPTGQ9UJJ9 305 aa2.78□□□□□ -1.96
PCM1-219ENST00000523540 ADAM28Q9UKQ2 775 aa2.78□□□□□ -1.96
PCM1-219ENST00000523540 IGLV4-69A0A075B6H9 119 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 C15orf38-AP3S2A0A0A6YYH1 394 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 OR5B21A6NL26 309 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 SS18L1O75177 396 aaPredicted RBP2.77□□□□□ -1.97
PCM1-219ENST00000523540 RDXP35241 583 aaKnown RBP2.77□□□□□ -1.97
PCM1-219ENST00000523540 ATP1B3P54709 279 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 LINC00315P59091 139 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 ACVR1Q04771 509 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 REG3AQ06141 175 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 FGL1Q08830 312 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 RSPO1Q2MKA7 263 aaPredicted RBP2.77□□□□□ -1.97
PCM1-219ENST00000523540 ZFP2Q6ZN57 461 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 FNDC5Q8NAU1 212 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 TRPV1Q8NER1 839 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 DTX3LQ8TDB6 740 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 MCOLN3Q8TDD5 553 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 UBE2Q2Q8WVN8 375 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 STARD4Q96DR4 205 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 TRIM44Q96DX7 344 aaPredicted RBP2.77□□□□□ -1.97
PCM1-219ENST00000523540 SLC41A3Q96GZ6 507 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 NPAS2Q99743 824 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 GBA3Q9H227 469 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 CLMPQ9H6B4 373 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 CALYQ9NYX4 217 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 BFARQ9NZS9 450 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 DEC1Q9P2X7 70 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 XCL2Q9UBD3 114 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 CDH9Q9ULB4 789 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 MMP17Q9ULZ9 603 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 PSG11Q9UQ72 335 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 KCNIP3Q9Y2W7 256 aa2.77□□□□□ -1.97
PCM1-219ENST00000523540 IGLV3-22A0A075B6J6 115 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 CCDC182A6NF36 153 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 DBTP11182 482 aaKnown RBP2.76□□□□□ -1.97
PCM1-219ENST00000523540 MAGP20916 626 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 GLRA2P23416 452 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 SLC26A3P40879 764 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 MAGEA8P43361 318 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 UBE2HP62256 183 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 GGTLC2Q14390 218 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 DGUOKQ16854 277 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 RFX4Q33E94 735 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 PPP1R42Q7Z4L9 355 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 THOC6Q86W42 341 aaKnown RBP2.76□□□□□ -1.97
PCM1-219ENST00000523540 NUDCD3Q8IVD9 361 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 SAXO1Q8IYX7 474 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 VN1R2Q8NFZ6 395 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 ZNF596Q8TC21 504 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 FAM110BQ8TC76 370 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 LRRC58Q96CX6 371 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 C10orf35Q96D05 121 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 ASB9Q96DX5 294 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 RPRD1AQ96P16 312 aaPredicted RBP2.76□□□□□ -1.97
PCM1-219ENST00000523540 COPS8Q99627 209 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 FAIM2Q9BWQ8 316 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 PLA2G2FQ9BZM2 168 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 VCXQ9H320 206 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 CDC42EP4Q9H3Q1 356 aaKnown RBP2.76□□□□□ -1.97
PCM1-219ENST00000523540 TPK1Q9H3S4 243 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 ZNF226Q9NYT6 803 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 TBX21Q9UL17 535 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 HEBP2Q9Y5Z4 205 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 MYO10Q9HD67 2058 aa2.76□□□□□ -1.97
PCM1-219ENST00000523540 IGKV2D-24A0A075B6R9 120 aa2.75□□□□□ -1.97
PCM1-219ENST00000523540 C11orf94C9JXX5 98 aa2.75□□□□□ -1.97
PCM1-219ENST00000523540 PEX7O00628 323 aa2.75□□□□□ -1.97
PCM1-219ENST00000523540 DLGAP1O14490 977 aa2.75□□□□□ -1.97
PCM1-219ENST00000523540 MTX2O75431 263 aa2.75□□□□□ -1.97
PCM1-219ENST00000523540 ZNF324O75467 553 aaPredicted RBP2.75□□□□□ -1.97
PCM1-219ENST00000523540 SUPT3HO75486 399 aa2.75□□□□□ -1.97
PCM1-219ENST00000523540 CLDN9O95484 217 aa2.75□□□□□ -1.97
PCM1-219ENST00000523540 IGLV2-23P01705 113 aa2.75□□□□□ -1.97
PCM1-219ENST00000523540 HPGDP15428 266 aa2.75□□□□□ -1.97
PCM1-219ENST00000523540 ERVK-25P63136 954 aa2.75□□□□□ -1.97
PCM1-219ENST00000523540 GPM6BQ13491 265 aa2.75□□□□□ -1.97
PCM1-219ENST00000523540 FZD2Q14332 565 aa2.75□□□□□ -1.97
PCM1-219ENST00000523540 SGCAQ16586 387 aa2.75□□□□□ -1.97
PCM1-219ENST00000523540 TMEM183BQ1AE95 376 aa2.75□□□□□ -1.97
PCM1-219ENST00000523540 LCN12Q6JVE5 192 aa2.75□□□□□ -1.97
PCM1-219ENST00000523540 ENPP6Q6UWR7 440 aa2.75□□□□□ -1.97
PCM1-219ENST00000523540 PLA2G4DQ86XP0 818 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms