RNA–Protein interactions for RNA: ENST00000523088.5

HDAC3-216, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-216ENST00000523088 ELAVL4P26378 380 aaKnown RBP6.91□□□□□ -1.3
HDAC3-216ENST00000523088 S100A2P29034 98 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 SSTR5P35346 364 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 BSGP35613 385 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 MNDAP41218 407 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 GRIA3P42263 894 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 MTNR1AP48039 350 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 RFX3P48380 749 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 STK19P49842 368 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-216ENST00000523088 NOVA1P51513 510 aaKnown RBP6.91□□□□□ -1.3
HDAC3-216ENST00000523088 UCP2P55851 309 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 TAS2R38P59533 333 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 SLC18A2Q05940 514 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 MESP2Q0VG99 397 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 SLC13A2Q13183 592 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 CAMK2GQ13555 558 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-216ENST00000523088 ZNF234Q14588 700 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 TAF9Q16594 264 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 CYP51A1Q16850 503 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 VMACQ2NL98 169 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 PRICKLE4Q2TBC4 344 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 PGGHGQ32M88 737 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 ZNF789Q5FWF6 425 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 RBM48Q5RL73 367 aaKnown RBP6.91□□□□□ -1.3
HDAC3-216ENST00000523088 PSAPL1Q6NUJ1 521 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 TMEM220Q6QAJ8 160 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 UQCC3Q6UW78 93 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 WDR88Q6ZMY6 472 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 RNF165Q6ZSG1 346 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 FAM183BPQ6ZVS7 135 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 CHST9Q7L1S5 443 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 SFTPA1Q8IWL2 248 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 BAP18Q8IXM2 172 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 DHRSXQ8N5I4 330 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 LMNTD1Q8N9Z9 388 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 OR4S2Q8NH73 311 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 WDR36Q8NI36 951 aaKnown RBP6.91□□□□□ -1.3
HDAC3-216ENST00000523088 ORAOV1Q8WV07 137 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 APH1BQ8WW43 257 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 CYGBQ8WWM9 190 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 RAB40AQ8WXH6 277 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 DNASE2BQ8WZ79 361 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 TFAP2BQ92481 460 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 EDEM1Q92611 657 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 ANKRD9Q96BM1 317 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-216ENST00000523088 NXNL1Q96CM4 212 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 ASB9Q96DX5 294 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 LMLNQ96KR4 655 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 DGAT2Q96PD7 388 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 ASCL2Q99929 193 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 ALG8Q9BVK2 526 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 FUNDC2Q9BWH2 189 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 TBL1XR1Q9BZK7 514 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 DSN1Q9H410 356 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 RANGRFQ9HD47 186 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-216ENST00000523088 UBE2TQ9NPD8 197 aaPredicted RBP6.91□□□□□ -1.3
HDAC3-216ENST00000523088 SPANXA1Q9NS26 97 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 TMEM181Q9P2C4 612 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 SLC17A6Q9P2U8 582 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 ONECUT1Q9UBC0 465 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 PHF11Q9UIL8 331 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 CDYLQ9Y232 598 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 PCDHB14Q9Y5E9 798 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 PTGDR2Q9Y5Y4 395 aa6.91□□□□□ -1.3
HDAC3-216ENST00000523088 DOCK4Q8N1I0 1966 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 ZCWPW2A0A1B0GU75 182 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 TMEM72A0PK05 275 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 TMEM218A2RU14 115 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 TCAF2A6NFQ2 919 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 ANKRD61A6NGH8 418 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 FAM74A7A6NL05 159 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 F5H5T6 163 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 AGRPO00253 132 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 TCF21O43680 179 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 DUX1O43812 170 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 LANCL1O43813 399 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 AP2A2O94973 939 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 TNFRSF6BO95407 300 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 TSPAN13O95857 204 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 THY1P04216 161 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 MPOP05164 745 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 ALPIP09923 528 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 FGF5P12034 268 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 AQP2P41181 271 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 WASP42768 502 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 AESQ08117 197 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 FABP9Q0Z7S8 132 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 HNRNPA0Q13151 305 aaKnown RBP6.9□□□□□ -1.3
HDAC3-216ENST00000523088 RAB32Q13637 225 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 MEP1AQ16819 746 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 SPDYE7PQ495Y7 208 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 FAM74A3Q4VXF1 159 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 PYCR3Q53H96 274 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 EIPR1Q53HC9 387 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 MS4A13Q5J8X5 152 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 SPIN3Q5JUX0 258 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 CATSPEREQ5SY80 951 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 TPRG1LQ5T0D9 272 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 LIPMQ5VYY2 423 aa6.9□□□□□ -1.3
HDAC3-216ENST00000523088 ZNF776Q68DI1 518 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms