RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 CHRDQ9H2X0 955 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 RXFP3Q9NSD7 469 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 MCUBQ9NWR8 336 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 IGHV1OR21-1A0A087WYE8 117 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 FAM172BPA6NC97 362 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 TVP23AA6NH52 213 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 OR6C70A6NIJ9 312 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 HCRTR2O43614 444 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 GATBO75879 557 aaKnown RBP9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 PIAS2O75928 621 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 RPP14O95059 124 aaKnown RBP9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 ZFPL1O95159 310 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 CD1AP06126 327 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 ADRB1P08588 477 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 FOLR1P15328 257 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 SDHBP21912 280 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 RPS27P42677 84 aaKnown RBP9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 BIKQ13323 160 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 EBPQ15125 230 aaKnown RBP9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 MTFR2Q6P444 385 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 MARCH3Q86UD3 253 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 IZUMO1Q8IYV9 350 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 HAVCR2Q8TDQ0 301 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 YIPF5Q969M3 257 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 ZFP3Q96NJ6 502 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 OR1F2PQ96R84 312 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 TSPAN10Q9H1Z9 355 aaPredicted RBP9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 ABRACLQ9P1F3 81 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 CACNG2Q9Y698 323 aa9.78□□□□□ -0.84
RAB11FIP1-204ENST00000522774 TCRBV16S1A1N1A0A5B0 115 aa9.77□□□□□ -0.84
RAB11FIP1-204ENST00000522774 KHNYNO15037 678 aaKnown RBP9.77□□□□□ -0.84
RAB11FIP1-204ENST00000522774 GPANK1O95872 356 aa9.77□□□□□ -0.84
RAB11FIP1-204ENST00000522774 IGF2P01344 180 aa9.77□□□□□ -0.84
RAB11FIP1-204ENST00000522774 CSF2RBP32927 897 aa9.77□□□□□ -0.84
RAB11FIP1-204ENST00000522774 ARL4DP49703 201 aa9.77□□□□□ -0.84
RAB11FIP1-204ENST00000522774 NR0B1P51843 470 aaKnown RBP9.77□□□□□ -0.84
RAB11FIP1-204ENST00000522774 SLC25A1P53007 311 aa9.77□□□□□ -0.84
RAB11FIP1-204ENST00000522774 HSD11B2P80365 405 aa9.77□□□□□ -0.84
RAB11FIP1-204ENST00000522774 EFR3AQ14156 821 aa9.77□□□□□ -0.84
RAB11FIP1-204ENST00000522774 ELAVL1Q15717 326 aaKnown RBP9.77□□□□□ -0.84
RAB11FIP1-204ENST00000522774 HES5Q5TA89 166 aa9.77□□□□□ -0.84
RAB11FIP1-204ENST00000522774 OVCH1Q7RTY7 1134 aa9.77□□□□□ -0.84
RAB11FIP1-204ENST00000522774 CADM4Q8NFZ8 388 aa9.77□□□□□ -0.84
RAB11FIP1-204ENST00000522774 CEP76Q8TAP6 659 aa9.77□□□□□ -0.84
RAB11FIP1-204ENST00000522774 RELTQ969Z4 430 aa9.77□□□□□ -0.84
RAB11FIP1-204ENST00000522774 CREB3L1Q96BA8 519 aa9.77□□□□□ -0.84
RAB11FIP1-204ENST00000522774 TMEM246Q9BRR3 403 aa9.77□□□□□ -0.84
RAB11FIP1-204ENST00000522774 LAT2Q9GZY6 243 aa9.77□□□□□ -0.84
RAB11FIP1-204ENST00000522774 ADAM19Q9H013 955 aa9.77□□□□□ -0.84
RAB11FIP1-204ENST00000522774 CACNA1CQ13936 2221 aa9.77□□□□□ -0.85
RAB11FIP1-204ENST00000522774 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.77□□□□□ -0.85
RAB11FIP1-204ENST00000522774 A0A1B0GTH9 108 aa9.77□□□□□ -0.85
RAB11FIP1-204ENST00000522774 SMLR1H3BR10 107 aa9.77□□□□□ -0.85
RAB11FIP1-204ENST00000522774 YES1P07947 543 aa9.77□□□□□ -0.85
RAB11FIP1-204ENST00000522774 SRMP19623 302 aa9.77□□□□□ -0.85
RAB11FIP1-204ENST00000522774 EPHA4P54764 986 aa9.77□□□□□ -0.85
RAB11FIP1-204ENST00000522774 RRAS2P62070 204 aaPredicted RBP9.77□□□□□ -0.85
RAB11FIP1-204ENST00000522774 HSF2Q03933 536 aa9.77□□□□□ -0.85
RAB11FIP1-204ENST00000522774 NTRK2Q16620 822 aa9.77□□□□□ -0.85
RAB11FIP1-204ENST00000522774 OTPQ5XKR4 325 aa9.77□□□□□ -0.85
RAB11FIP1-204ENST00000522774 SLC16A9Q7RTY1 509 aa9.77□□□□□ -0.85
RAB11FIP1-204ENST00000522774 PRSS45Q7RTY3 260 aa9.77□□□□□ -0.85
RAB11FIP1-204ENST00000522774 NANOGNBQ7Z5D8 188 aa9.77□□□□□ -0.85
RAB11FIP1-204ENST00000522774 TIGD4Q8IY51 512 aa9.77□□□□□ -0.85
RAB11FIP1-204ENST00000522774 TCTE3Q8IZS6 198 aa9.77□□□□□ -0.85
RAB11FIP1-204ENST00000522774 MRM2Q9UI43 246 aaKnown RBP9.77□□□□□ -0.85
RAB11FIP1-204ENST00000522774 ZNF281Q9Y2X9 895 aa9.77□□□□□ -0.85
RAB11FIP1-204ENST00000522774 CEP192Q8TEP8 1941 aa9.77□□□□□ -0.85
RAB11FIP1-204ENST00000522774 ARID1BQ8NFD5 2236 aaPredicted RBP9.77□□□□□ -0.85
RAB11FIP1-204ENST00000522774 ZNF879B4DU55 563 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 GPRIN2O60269 458 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 UBL3O95164 117 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 TXNDC12O95881 172 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 APEHP13798 732 aaKnown RBP9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 BCKDHBP21953 392 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 ITPKBP27987 946 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 IL12BP29460 328 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 EVI2BP34910 448 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 NSDHLQ15738 373 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 OR6V1Q8N148 313 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 ASCC1Q8N9N2 400 aaKnown RBP9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 ZNF671Q8TAW3 534 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 MAP6Q96JE9 813 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 GRHPRQ9UBQ7 328 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 SPATA2Q9UM82 520 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 SLC6A5Q9Y345 797 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 PCDHGA9Q9Y5G4 932 aaKnown RBP9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 NUP210LQ5VU65 1888 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 TRAV6A0A075B6T7 132 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 FAM47E-STBD1D6RA91 191 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 UPK3AO75631 287 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 FBLP22087 321 aaKnown RBP9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 BCL2L15Q5TBC7 163 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 STPG1Q5TH74 334 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 LIPNQ5VXI9 398 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 SIAH3Q8IW03 269 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 SLC35F3Q8IY50 421 aa9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 ZNF433Q8N7K0 673 aaPredicted RBP9.76□□□□□ -0.85
RAB11FIP1-204ENST00000522774 MRPL48Q96GC5 212 aaKnown RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms