RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 RPS15P62841 145 aaKnown RBP12.77□□□□□ -0.37
SYNPO-205ENST00000522122 S100A12P80511 92 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 ARF1P84077 181 aaKnown RBP12.77□□□□□ -0.37
SYNPO-205ENST00000522122 GALEQ14376 348 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 DPY19L2P2Q6ZN68 376 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 ACBD4Q8NC06 268 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 SGPP1Q9BX95 441 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 CHRDQ9H2X0 955 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 REV1Q9UBZ9 1251 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 EDARQ9UNE0 448 aa12.77□□□□□ -0.37
SYNPO-205ENST00000522122 H7C1C5 153 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 BRINP1O60477 761 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 BPNT1O95861 308 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 UBBP0CG47 229 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 UBCP0CG48 685 aaKnown RBP12.76□□□□□ -0.37
SYNPO-205ENST00000522122 S100PP25815 95 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 TNFRSF4P43489 277 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 CSNK1A1P48729 337 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 CLDN20P56880 219 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 LCN6P62502 163 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 TCTN3Q6NUS6 607 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 OR1J4Q8NGS1 313 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 OR10A5Q9H207 317 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 CUTCQ9NTM9 273 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 VSX1Q9NZR4 365 aaPredicted RBP12.76□□□□□ -0.37
SYNPO-205ENST00000522122 TMEM82A0PJX8 343 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 C1orf196B1AJZ1 125 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 CD14P08571 375 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 PRKACBP22694 351 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 GPLD1P80108 840 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 SORDQ00796 357 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 COX15Q7KZN9 410 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 ZNF511Q8NB15 262 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 STEAP2Q8NFT2 490 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 OR6F1Q8NGZ6 308 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 EID2BQ96D98 161 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 B3GNT2Q9NY97 397 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 FTCDNL1E5RQL4 147 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 SMLR1H3BR10 107 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 GALR3O60755 368 aaPredicted RBP12.76□□□□□ -0.37
SYNPO-205ENST00000522122 CD38P28907 300 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 MMP21Q8N119 569 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 IL22RA1Q8N6P7 574 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 ZNF611Q8N823 705 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 C19orf47Q8N9M1 422 aaKnown RBP12.76□□□□□ -0.37
SYNPO-205ENST00000522122 BOLLQ8N9W6 283 aaKnown RBP12.76□□□□□ -0.37
SYNPO-205ENST00000522122 SMAP2Q8WU79 429 aaPredicted RBP12.76□□□□□ -0.37
SYNPO-205ENST00000522122 BCL7CQ8WUZ0 217 aaPredicted RBP12.76□□□□□ -0.37
SYNPO-205ENST00000522122 MS4A6EQ96DS6 147 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 TRABD2BA6NFA1 517 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 RGS13O14921 159 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 AGPAT2O15120 278 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 TMPRSS11DO60235 418 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 ATP1B1P05026 303 aa12.76□□□□□ -0.37
SYNPO-205ENST00000522122 NFYAP23511 347 aaPredicted RBP12.76□□□□□ -0.37
SYNPO-205ENST00000522122 ZNF236Q9UL36 1845 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 EFCAB7A8K855 629 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 NPIPB8E9PQR5 432 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 IGHA2P01877 340 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 OTX2P32243 289 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 AKR1C8PQ5T2L2 129 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 GPR157Q5UAW9 335 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 ZNF529Q6P280 563 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 ALKAL2Q6UX46 152 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 RDH10Q8IZV5 341 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 SLC43A2Q8N370 569 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 FAM160A2Q8N612 972 aaPredicted RBP12.75□□□□□ -0.37
SYNPO-205ENST00000522122 OR7G2Q8NG99 324 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 SFXN2Q96NB2 322 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 HHIPQ96QV1 700 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 TEAD3Q99594 435 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 FGF20Q9NP95 211 aaPredicted RBP12.75□□□□□ -0.37
SYNPO-205ENST00000522122 SAGE1Q9NXZ1 904 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 LRIT1Q9P2V4 623 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 PLXNA1Q9UIW2 1896 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 PIP5K1CO60331 668 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 ICMTO60725 284 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 IGHG1P01857 330 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 OPN1LWP04000 364 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 BDKRB2P30411 391 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 LIM2P55344 173 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 IFITM3Q01628 133 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 SMAD2Q15796 467 aaKnown RBP12.75□□□□□ -0.37
SYNPO-205ENST00000522122 SSX1Q16384 188 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 ZNF836Q6ZNA1 936 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 IDO2Q6ZQW0 420 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 SPPL3Q8TCT6 385 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 SLC41A2Q96JW4 573 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 WDR76Q9H967 626 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 DUSP22Q9NRW4 184 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 COPS3Q9UNS2 423 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 A0A1W2PR48 441 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 SBK2P0C263 348 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 IFNGR1P15260 489 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 HOXB9P17482 250 aaPredicted RBP12.75□□□□□ -0.37
SYNPO-205ENST00000522122 CD22P20273 847 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 IRS1P35568 1242 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 FASLGP48023 281 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 VEGFCP49767 419 aa12.75□□□□□ -0.37
SYNPO-205ENST00000522122 ZP2Q05996 745 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms