RNA–Protein interactions for RNA: ENST00000521387.1

CTNNA1-227, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 871 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-227ENST00000521387 PAQR8Q8TEZ7 354 aa6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 APH1BQ8WW43 257 aa6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 TAF15Q92804 592 aaKnown RBP eCLIP6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 GAL3ST3Q96A11 431 aa6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 RERGQ96A58 199 aaPredicted RBP6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 C3orf49Q96BT1 292 aa6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 OTUB1Q96FW1 271 aaPredicted RBP6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 VMP1Q96GC9 406 aa6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 C16orf58Q96GQ5 468 aa6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 COG8Q96MW5 612 aa6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 COL21A1Q96P44 957 aa6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 NODALQ96S42 347 aa6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 PSD2Q9BQI7 771 aa6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 CACNG6Q9BXT2 260 aa6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 CCDC90BQ9GZT6 254 aa6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 MMP27Q9H306 513 aa6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 C12orf49Q9H741 205 aa6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 ANKRA2Q9H9E1 313 aa6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 ADAP2Q9NPF8 381 aa6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 ZCCHC3Q9NUD5 404 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 LYARQ9NX58 379 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 BLOC1S6Q9UL45 172 aa6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 POFUT2Q9Y2G5 429 aa6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 TPRKBQ9Y3C4 175 aa6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 FAM32AQ9Y421 112 aaKnown RBP6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 RNF115Q9Y4L5 304 aa6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 SNX5Q9Y5X3 404 aa6.45□□□□□ -1.38
CTNNA1-227ENST00000521387 LYSTQ99698 3801 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 PCNX3Q9H6A9 2034 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 TRBV4-1A0A0J9YWV2 114 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 A0A1B0GVG6 124 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 A0A1W2PPW3 197 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 ZNF99A8MXY4 864 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 EMC8O43402 210 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 CHST10O43529 356 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 TRIM3O75382 744 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 NME6O75414 186 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 GASTP01350 101 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 IFNW1P05000 195 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 CHRM4P08173 479 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 CPN1P15169 458 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 GDF1P27539 372 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 IL2RGP31785 369 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 KRT20P35900 424 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 GATA4P43694 442 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 GSSP48637 474 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 KHKP50053 298 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 TMBIM6P55061 237 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 SH3BGRP55822 239 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 EEF1A1P68104 462 aaKnown RBP6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 OLR1P78380 273 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 RELAQ04206 551 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 EMX1Q04741 257 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 RGS1Q08116 209 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 TGM3Q08188 693 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 LASP1Q14847 261 aaKnown RBP6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 SEC23BQ15437 767 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 LTB4RQ15722 352 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 NCMAPQ5T1S8 102 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 EEF1A1P5Q5VTE0 462 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 FNDC7Q5VTL7 733 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 ZNF770Q6IQ21 691 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 DHRS4L2Q6PKH6 230 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 TMEM107Q6UX40 140 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 SZRD1Q7Z422 152 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 HMGN2P46Q86SG4 172 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 ZNF321PQ8N8H1 164 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 OR9A2Q8NGT5 310 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 RHOXF1Q8NHV9 184 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 VANGL1Q8TAA9 524 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 MIPOL1Q8TD10 442 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 ABTB1Q969K4 478 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 CTHRC1Q96CG8 243 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 RBMXL1Q96E39 390 aaKnown RBP6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 ELP4Q96EB1 424 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 SLC35A4Q96G79 324 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 DHRS1Q96LJ7 313 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 OR7D2Q96RA2 312 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 SIGLEC11Q96RL6 698 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 ZNF607Q96SK3 696 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 FUZQ9BT04 418 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 DCUN1D5Q9BTE7 237 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 C1QTNF5Q9BXJ0 243 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 TRIM2Q9C040 744 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 SLITRK2Q9H156 845 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 NMNAT1Q9HAN9 279 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 BCL2L10Q9HD36 194 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 SCN3BQ9NY72 215 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 P2RX2Q9UBL9 471 aa6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 BOKQ9UMX3 212 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 GPC6Q9Y625 555 aaPredicted RBP6.44□□□□□ -1.38
CTNNA1-227ENST00000521387 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.43□□□□□ -1.38
CTNNA1-227ENST00000521387 LRP5LA4QPB2 252 aa6.43□□□□□ -1.38
CTNNA1-227ENST00000521387 M0R129 80 aa6.43□□□□□ -1.38
CTNNA1-227ENST00000521387 M0R3H8 397 aa6.43□□□□□ -1.38
CTNNA1-227ENST00000521387 RGS10O43665 173 aa6.43□□□□□ -1.38
CTNNA1-227ENST00000521387 SERPINB7O75635 380 aa6.43□□□□□ -1.38
CTNNA1-227ENST00000521387 TRAPPC6AO75865 159 aa6.43□□□□□ -1.38
CTNNA1-227ENST00000521387 HMGN2P05204 90 aaKnown RBP6.43□□□□□ -1.38
CTNNA1-227ENST00000521387 NR2F6P10588 404 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms