RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 GSTA3Q16772 222 aa8.13□□□□□ -1.11
CTNNA1-221ENST00000520339 C11orf71Q6IPW1 123 aa8.13□□□□□ -1.11
CTNNA1-221ENST00000520339 CGB2Q6NT52 195 aa8.13□□□□□ -1.11
CTNNA1-221ENST00000520339 TRIML2Q8N7C3 387 aa8.13□□□□□ -1.11
CTNNA1-221ENST00000520339 GLB1L3Q8NCI6 653 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-221ENST00000520339 OR52E4Q8NGH9 312 aa8.13□□□□□ -1.11
CTNNA1-221ENST00000520339 OR52N5Q8NH56 324 aa8.13□□□□□ -1.11
CTNNA1-221ENST00000520339 OR52E6Q96RD3 313 aa8.13□□□□□ -1.11
CTNNA1-221ENST00000520339 NAA11Q9BSU3 229 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-221ENST00000520339 AMBRA1Q9C0C7 1298 aa8.13□□□□□ -1.11
CTNNA1-221ENST00000520339 BARX1Q9HBU1 254 aaPredicted RBP8.13□□□□□ -1.11
CTNNA1-221ENST00000520339 THAP1Q9NVV9 213 aa8.13□□□□□ -1.11
CTNNA1-221ENST00000520339 KLHL14Q9P2G3 628 aa8.13□□□□□ -1.11
CTNNA1-221ENST00000520339 MGAT4BQ9UQ53 548 aa8.13□□□□□ -1.11
CTNNA1-221ENST00000520339 ARL2BPQ9Y2Y0 163 aa8.13□□□□□ -1.11
CTNNA1-221ENST00000520339 FLVCR1Q9Y5Y0 555 aa8.13□□□□□ -1.11
CTNNA1-221ENST00000520339 FREM1Q5H8C1 2179 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 A0A1W2PR80 420 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 EIF1BO60739 113 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 TGDSO95455 350 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 DBIP07108 87 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 DBHP09172 617 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 IL7RP16871 459 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 TTKP33981 857 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 ACAA2P42765 397 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 PDCD4Q53EL6 469 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 MRPL2Q5T653 305 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 TSPO2Q5TGU0 170 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 AGAP6Q5VW22 663 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 OR7E24Q6IFN5 339 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 PAQR6Q6TCH4 344 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 KLHL17Q6TDP4 642 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 TMEM108Q6UXF1 575 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 CASP12Q6UXS9 341 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 B3GLCTQ6Y288 498 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 ZBTB46Q86UZ6 589 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 PEX5LQ8IYB4 626 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 ZNF440Q8IYI8 595 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 ZIC4Q8N9L1 334 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 OR10H5Q8NGA6 315 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 PNPT1Q8TCS8 783 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 WDR60Q8WVS4 1066 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 DDIT4LQ96D03 193 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 MAELQ96JY0 434 aaKnown RBP8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 HS6ST2Q96MM7 605 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 ZBTB18Q99592 522 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 DHRS9Q9BPW9 319 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 SIKE1Q9BRV8 207 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 C1QTNF6Q9BXI9 259 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 SLC17A5Q9NRA2 495 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 SLC7A10Q9NS82 523 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 SLC6A13Q9NSD5 602 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 CBLN4Q9NTU7 201 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 FAIMQ9NVQ4 179 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 RLIMQ9NVW2 624 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 C14orf119Q9NWQ9 140 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 PARPBPQ9NWS1 579 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 ASH2LQ9UBL3 628 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 SLC9A8Q9Y2E8 581 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 SPEF1Q9Y4P9 236 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 ABCA1O95477 2261 aa8.12□□□□□ -1.11
CTNNA1-221ENST00000520339 DSPPQ9NZW4 1301 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 A0A096LNT2 108 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 CDHR4A6H8M9 788 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 LIPT2A6NK58 231 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 TRPC5OSA6NMA1 111 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 SLCO1B7G3V0H7 640 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 RFXANKO14593 260 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 CD5LO43866 347 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 SSX4O60224 188 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 SLC22A3O75751 556 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 IL6P05231 212 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 TFPTP0C1Z6 253 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 GKN3PP0CG01 181 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 ZCCHC18P0CG32 403 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 IDO1P14902 403 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 P2RY4P51582 365 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 SPOCK1Q08629 439 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 SF3A3Q12874 501 aaKnown RBP eCLIP8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 CEACAM7Q14002 265 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 SLC22A25Q6T423 547 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 MAVSQ7Z434 540 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 VRK2Q86Y07 508 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 CLIP4Q8N3C7 705 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 C17orf78Q8N4C9 275 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 TMEM99Q8N816 258 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 C1orf162Q8NEQ5 155 aaPredicted RBP8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 OR9K2Q8NGE7 335 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 OR52P1PQ8NH57 321 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 ABHD4Q8TB40 342 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 SLC38A5Q8WUX1 472 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 C10orf82Q8WW14 230 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 TMEM45BQ96B21 275 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 BOD1Q96IK1 185 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 ADAD1Q96M93 576 aaKnown RBP8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 SF3B5Q9BWJ5 86 aaKnown RBP8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 CACNG6Q9BXT2 260 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 MS4A5Q9H3V2 200 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 ZIM2Q9NZV7 527 aa8.11□□□□□ -1.11
CTNNA1-221ENST00000520339 UPB1Q9UBR1 384 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms