RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 SPEM2Q0P670 501 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 DUSP7Q16829 419 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 C1orf220Q5T0J3 134 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 ANKRD16Q6P6B7 361 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 CCBE1Q6UXH8 406 aaPredicted RBP10.2□□□□□ -0.78
TRIM41-209ENST00000515834 DTWD1Q8N5C7 304 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 FRMD1Q8N878 549 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 ZNF420Q8TAQ5 688 aaPredicted RBP10.2□□□□□ -0.78
TRIM41-209ENST00000515834 ZNF419Q96HQ0 510 aaPredicted RBP10.2□□□□□ -0.78
TRIM41-209ENST00000515834 UHRF2Q96PU4 802 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 MRPS28Q9Y2Q9 187 aaKnown RBP10.2□□□□□ -0.78
TRIM41-209ENST00000515834 PHRF1Q9P1Y6 1649 aaKnown RBP10.2□□□□□ -0.78
TRIM41-209ENST00000515834 TRAV36DV7A0A075B6V5 113 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 ZCWPW2A0A1B0GU75 182 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 APOA2P02652 100 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 GABREP78334 506 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 MARCH8Q5T0T0 291 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 PRSS48Q7RTY5 328 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 COMMD7Q86VX2 200 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 ARFGAP1Q8N6T3 406 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 ELSPBP1Q96BH3 223 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 SLC22A12Q96S37 553 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 KCNJ15Q99712 375 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 BARHL1Q9BZE3 327 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 ERVMER34-1Q9H9K5 563 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 KCNJ16Q9NPI9 418 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 CCDC88AQ3V6T2 1871 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 RGS11O94810 467 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 B3GALT4O96024 378 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 ADRA1AP35348 466 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 SERPINF1P36955 418 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 CSNK1DP48730 415 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 GPLD1P80108 840 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 ASB11Q8WXH4 323 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 SLC46A1Q96NT5 459 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 CLEC1BQ9P126 229 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 H3BMQ9 156 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 BOLA2-SMG1P6H3BVE0 249 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 LYRM1O43325 122 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 CALCBP10092 127 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 EIF1P41567 113 aaKnown RBP10.2□□□□□ -0.78
TRIM41-209ENST00000515834 HBA1P69905 142 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 FAPQ12884 760 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 ARHGAP11BQ3KRB8 267 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 METTL11BQ5VVY1 283 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 ZFP82Q8N141 532 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 MMP28Q9H239 520 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 PCDHGA7Q9Y5G6 932 aa10.2□□□□□ -0.78
TRIM41-209ENST00000515834 KDM8Q8N371 416 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 BPIFCQ8NFQ6 507 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 UTP4Q969X6 686 aaKnown RBP10.19□□□□□ -0.78
TRIM41-209ENST00000515834 RAB3CQ96E17 227 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 ELMOD3Q96FG2 381 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 THAP10Q9P2Z0 257 aaPredicted RBP10.19□□□□□ -0.78
TRIM41-209ENST00000515834 KIF25Q9UIL4 384 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 RASD1Q9Y272 281 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 HSPE1-MOB4S4R3N1 261 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 TRAF3IP2O43734 574 aaPredicted RBP10.19□□□□□ -0.78
TRIM41-209ENST00000515834 PRKACAP17612 351 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 RPS23P62266 143 aaKnown RBP10.19□□□□□ -0.78
TRIM41-209ENST00000515834 NKAIN1Q4KMZ8 207 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 LCN8Q6JVE9 175 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 NAA40Q86UY6 237 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 SLC35F3Q8IY50 421 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 ZNF454Q8N9F8 522 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 HAVCR2Q8TDQ0 301 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 TRUB1Q8WWH5 349 aaKnown RBP10.19□□□□□ -0.78
TRIM41-209ENST00000515834 TNFRSF13CQ96RJ3 184 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 LHPPQ9H008 270 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 HS3ST3A1Q9Y663 406 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 A0A096LPE4 126 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 A0A1W2PPZ6 126 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 C4orf47A7E2U8 309 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 G3V2L1 256 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 HLA-AP01891 365 aaKnown RBP10.19□□□□□ -0.78
TRIM41-209ENST00000515834 CDK1P06493 297 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 FAM157BP0CG42 384 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 MYF5P13349 255 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 GABARAPL2P60520 117 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 SYT9Q86SS6 491 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 SLC37A2Q8TED4 501 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 ZNF582Q96NG8 517 aaPredicted RBP10.19□□□□□ -0.78
TRIM41-209ENST00000515834 THAP7Q9BT49 309 aaPredicted RBP10.19□□□□□ -0.78
TRIM41-209ENST00000515834 HEYLQ9NQ87 328 aaPredicted RBP10.19□□□□□ -0.78
TRIM41-209ENST00000515834 FBXO24O75426 580 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 TGM6O95932 706 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 CDK4P11802 303 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 RAB15P59190 212 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 ZNF252P-AS1Q0IIN9 211 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 BPIFB2Q8N4F0 458 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 TMEM163Q8TC26 289 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 ZNF75AQ96N20 296 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 SGCEO43556 437 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 ELAVL4P26378 380 aaKnown RBP10.19□□□□□ -0.78
TRIM41-209ENST00000515834 CST5P28325 142 aaPredicted RBP10.19□□□□□ -0.78
TRIM41-209ENST00000515834 MC2RQ01718 297 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 C15orf39Q6ZRI6 1047 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 FCRLAQ7L513 359 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 SLC7A13Q8TCU3 470 aa10.19□□□□□ -0.78
TRIM41-209ENST00000515834 KCNE4Q8WWG9 221 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms