RNA–Protein interactions for RNA: ENST00000512107.5

MATR3-238, Transcript of matrin 3, human

TSL 4

Gene MATR3, Length 579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-238	ENST00000512107	ITLN2	Q8WWU7	325 aa	Predicted RBP	12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	CENPN	Q96H22	339 aa	Predicted RBP	12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	OXGR1	Q96P68	337 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	SLC29A1	Q99808	456 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	EMC6	Q9BV81	110 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	ASPN	Q9BXN1	380 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	KLHL4	Q9C0H6	718 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	YY1AP1	Q9H869	796 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	FANCF	Q9NPI8	374 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	MED29	Q9NX70	200 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	PRSS50	Q9UI38	385 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	TMEFF2	Q9UIK5	374 aa	Predicted RBP	12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	B3GALT5	Q9Y2C3	310 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	CORIN	Q9Y5Q5	1042 aa		12.91	□□□□□ -0.34
MATR3-238	ENST00000512107	EIF1B	O60739	113 aa	Known RBP	12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	SERPINI2	O75830	405 aa		12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	BAG2	O95816	211 aa		12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	SAG	P10523	405 aa	Predicted RBP	12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	ANPEP	P15144	967 aa		12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	FPR3	P25089	353 aa		12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	SELENOP	P49908	381 aa		12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	CASP6	P55212	293 aa		12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	PUDP	Q08623	228 aa		12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	TSPAN31	Q12999	210 aa		12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	PDK3	Q15120	406 aa		12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	ZBED5	Q49AG3	693 aa		12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	FAHD1	Q6P587	224 aa		12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	NANOGNB	Q7Z5D8	188 aa		12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	OAF	Q86UD1	273 aa		12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	GMPPA	Q96IJ6	420 aa	Predicted RBP	12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	SAMD8	Q96LT4	415 aa		12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	TM9SF2	Q99805	663 aa		12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	DGCR6L	Q9BY27	220 aa		12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	GABARAPL1	Q9H0R8	117 aa		12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	OPN3	Q9H1Y3	402 aa	Predicted RBP	12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	C12orf49	Q9H741	205 aa		12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	RASD1	Q9Y272	281 aa		12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	SLC5A6	Q9Y289	635 aa		12.9	□□□□□ -0.34
MATR3-238	ENST00000512107	FLNC	Q14315	2725 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107		A0A1B0GUH1	482 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	LOC102725191	A0A1B0GVB3	256 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	SOCS2	O14508	198 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	E2F6	O75461	281 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	ZNF432	O94892	652 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	SOX14	O95416	240 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	IL2RA	P01589	272 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	YES1	P07947	543 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	FCGR1A	P12314	374 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	IFNGR1	P15260	489 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	AHCY	P23526	432 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	CTSS	P25774	331 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	POLR2I	P36954	125 aa	Known RBP	12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	CLDN17	P56750	224 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	POU3F1	Q03052	451 aa	Predicted RBP	12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	POU4F3	Q15319	338 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	EEF1A1P5	Q5VTE0	462 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	LPCAT4	Q643R3	524 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	TMEM225	Q6GV28	225 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	ZNF474	Q6S9Z5	364 aa	Predicted RBP	12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	ZNF620	Q6ZNG0	422 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	FAM214B	Q7L5A3	538 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	RRM2B	Q7LG56	351 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	SLC43A2	Q8N370	569 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	CLDN22	Q8N7P3	220 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	CNEP1R1	Q8N9A8	125 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	ZNF610	Q8N9Z0	462 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	OR4Q3	Q8NH05	313 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	RND1	Q92730	232 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	ZHX1-C8orf76	Q96EF9	292 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	TSPAN32	Q96QS1	320 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	C6orf203	Q9P0P8	240 aa	Predicted RBP	12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	MGAT4B	Q9UQ53	548 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	TMEM5	Q9Y2B1	443 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	ADAM18	Q9Y3Q7	739 aa		12.89	□□□□□ -0.35
MATR3-238	ENST00000512107	DIDO1	Q9BTC0	2240 aa	Known RBP	12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	NKX2-6	A6NCS4	301 aa		12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	ARRDC5	A6NEK1	342 aa		12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	WIPF3	A6NGB9	483 aa		12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	ZNF724	A8MTY0	619 aa		12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	RNF13	O43567	381 aa		12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	IGHV3-9	P01782	118 aa		12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	ZNF23	P17027	643 aa		12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	HOXB6	P17509	224 aa	Known RBP	12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	BMP5	P22003	454 aa		12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	GRN	P28799	593 aa	Known RBP	12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	GTF2E2	P29084	291 aa	Known RBP	12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	EPHA2	P29317	976 aa		12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	SLC9A3	P48764	834 aa		12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	CTXN1	P60606	82 aa		12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	ERVK-25	P63136	954 aa		12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	PPP2R2B	Q00005	443 aa		12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	MFSD13A	Q14CX5	517 aa		12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	RNPS1	Q15287	305 aa	Known RBP	12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	ARMC4	Q5T2S8	1044 aa		12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	TMEM211	Q6ICI0	200 aa		12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	TFAP2E	Q6VUC0	442 aa		12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	FAM122B	Q7Z309	247 aa		12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	PXK	Q7Z7A4	578 aa		12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	STK32C	Q86UX6	486 aa		12.88	□□□□□ -0.35
MATR3-238	ENST00000512107	NRG4	Q8WWG1	115 aa		12.88	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms