RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 ZNF331Q9NQX6 463 aaPredicted RBP10.07□□□□□ -0.8
CPNE4-209ENST00000512055 PTTG3PQ9NZH4 202 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 PCDHGA9Q9Y5G4 932 aaKnown RBP10.07□□□□□ -0.8
CPNE4-209ENST00000512055 HSPE1-MOB4S4R3N1 261 aa10.07□□□□□ -0.8
CPNE4-209ENST00000512055 SOBPA7XYQ1 873 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 ANKRD28O15084 1053 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 PDGFBP01127 241 aaPredicted RBP10.06□□□□□ -0.8
CPNE4-209ENST00000512055 HBE1P02100 147 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 DHPSP49366 369 aaPredicted RBP10.06□□□□□ -0.8
CPNE4-209ENST00000512055 CXADRP78310 365 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 PRDX1Q06830 199 aaKnown RBP10.06□□□□□ -0.8
CPNE4-209ENST00000512055 ZMAT1Q5H9K5 638 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 AWAT2Q6E213 333 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 Q6ZSR6 202 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 ABHD12BQ7Z5M8 362 aaPredicted RBP10.06□□□□□ -0.8
CPNE4-209ENST00000512055 MS4A15Q8N5U1 240 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 OR2T33Q8NG76 320 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 SEC22AQ96IW7 307 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 SNX18Q96RF0 628 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 DHRS9Q9BPW9 319 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 FKRPQ9H9S5 495 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 SDHAF3Q9NRP4 125 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 GOLT1BQ9Y3E0 138 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 GFYI3L273 518 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 SNCGO76070 127 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 IL1AP01583 271 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 RNH1P13489 461 aaKnown RBP10.06□□□□□ -0.8
CPNE4-209ENST00000512055 FGF7P21781 194 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 C21orf33P30042 268 aaPredicted RBP10.06□□□□□ -0.8
CPNE4-209ENST00000512055 GCGRP47871 477 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 UBE2G2P60604 165 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 HHEXQ03014 270 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 SQSTM1Q13501 440 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 PRSS48Q7RTY5 328 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 GPR119Q8TDV5 335 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 RAB18Q9NP72 206 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 PRTFDC1Q9NRG1 225 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 SLC25A37Q9NYZ2 338 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 CNIH4Q9P003 139 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 CA14Q9ULX7 337 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 ANTXRLA6NF34 631 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 C11orf98E9PRG8 122 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 PRKRAO75569 313 aaKnown RBP10.06□□□□□ -0.8
CPNE4-209ENST00000512055 P2RX3P56373 397 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 B4GALNT1Q00973 533 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 TLE4Q04727 773 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 TCTN1Q2MV58 587 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 GKN2Q86XP6 184 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 PRR18Q8N4B5 295 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 PARP16Q8N5Y8 322 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 NECAP1Q8NC96 275 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 MED18Q9BUE0 208 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 ESRP2Q9H6T0 727 aaKnown RBP10.06□□□□□ -0.8
CPNE4-209ENST00000512055 SRA1Q9HD15 236 aaKnown RBP10.06□□□□□ -0.8
CPNE4-209ENST00000512055 ACOT13Q9NPJ3 140 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 SLC39A9Q9NUM3 307 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 ACOXLQ9NUZ1 547 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 A6NLC8 198 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 ACOT7O00154 380 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 CTSLP07711 333 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 SOX3P41225 446 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 SLC6A12P48065 614 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 EMX1Q04741 257 aaPredicted RBP10.06□□□□□ -0.8
CPNE4-209ENST00000512055 OR2T2Q6IF00 324 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 TOMM20LQ6UXN7 152 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 RNF111Q6ZNA4 994 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 USP53Q70EK8 1073 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 UBAC2Q8NBM4 344 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 CPNE4Q96A23 557 aaPredicted RBP10.06□□□□□ -0.8
CPNE4-209ENST00000512055 PEX11GQ96HA9 241 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 NICN1Q9BSH3 213 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 NXF2Q9GZY0 626 aaKnown RBP10.06□□□□□ -0.8
CPNE4-209ENST00000512055 SLC22A11Q9NSA0 550 aa10.06□□□□□ -0.8
CPNE4-209ENST00000512055 TRBV5-4A0A0C4DH59 114 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 FOXE1O00358 373 aaPredicted RBP10.05□□□□□ -0.8
CPNE4-209ENST00000512055 SCDO00767 359 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 CFIP05156 583 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 PIGAP37287 484 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 DAPP51397 102 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 METAP1P53582 386 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 BAMBIQ13145 260 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 ZNF74Q16587 644 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 ZNF765Q7L2R6 523 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 OR4C15Q8NGM1 316 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 RLN3Q8WXF3 142 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 ASB16Q96NS5 453 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 MEPEQ9NQ76 525 aaPredicted RBP10.05□□□□□ -0.8
CPNE4-209ENST00000512055 SLC2A4RGQ9NR83 387 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 KCNIP1Q9NZI2 227 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 TMPRSS11EQ9UL52 423 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 OR51B4Q9Y5P0 310 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 CROCCQ5TZA2 2017 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 SLC5A10A0PJK1 596 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 PRSS38A1L453 326 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 DVL1O14640 695 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 LALBAP00709 142 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 FURINP09958 794 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 CTRB1P17538 263 aa10.05□□□□□ -0.8
CPNE4-209ENST00000512055 HIST1H1TP22492 207 aaPredicted RBP10.05□□□□□ -0.8
CPNE4-209ENST00000512055 HLA-DMAP28067 261 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms