RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 MMP28Q9H239 520 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 SEC61A2Q9H9S3 476 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ZFP14Q9HCL3 533 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 MANBALQ9NQG1 85 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 LANCL2Q9NS86 450 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 OLAHQ9NV23 265 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 RABAC1Q9UI14 185 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 CDC14AQ9UNH5 594 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 MOKQ9UQ07 419 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ZFP30Q9Y2G7 519 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 TRAPPC1Q9Y5R8 145 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 TRBV2A0A0J9YWF9 115 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 OR5K3A6NET4 321 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 C19orf81C9J6K1 198 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 C1QTNF3-AMACRE9PGA6 284 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 M0QYG6 137 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 M0R296 226 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 MFNGO00587 321 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ST8SIA3O43173 380 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 TGFB1I1O43294 461 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 TYROBPO43914 113 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ETHE1O95571 254 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 CDS2O95674 445 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 CST4P01036 141 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 TK1P04183 234 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ADH4P08319 380 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 RPA2P15927 270 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ENGP17813 658 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 NPY1RP25929 384 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ABCD3P28288 659 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 NTSR1P30989 418 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 SREBF1P36956 1147 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 SRP14P37108 136 aaKnown RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 NHLH1Q02575 133 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 SRSF4Q08170 494 aaKnown RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 ZNF543Q08ER8 600 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 CLN3Q13286 438 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 LTB4RQ15722 352 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 LRRC26Q2I0M4 334 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 TUSC1Q2TAM9 212 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 SMUG1Q53HV7 270 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 RNF180Q86T96 592 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ZNF429Q86V71 674 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ZFAND4Q86XD8 727 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 NRSN1Q8IZ57 195 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ZDHHC14Q8IZN3 488 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 C10orf126Q8N4M7 172 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 COX18Q8N8Q8 333 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 OR4D6Q8NGJ1 314 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 OR1L3Q8NH93 324 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 PROKR1Q8TCW9 393 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 MMABQ96EY8 250 aaPredicted RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 FAM210BQ96KR6 192 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 SAMD8Q96LT4 415 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 GMLQ99445 158 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 GPR22Q99680 433 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 NKX3-1Q99801 234 aaPredicted RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 MECRQ9BV79 373 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 NAA50Q9GZZ1 169 aaKnown RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 OR2D2Q9H210 308 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 FZD3Q9NPG1 666 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 PRDM7Q9NQW5 492 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 RNF19AQ9NV58 838 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 VPS29Q9UBQ0 182 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 HSPB7Q9UBY9 170 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 OR14J1Q9UGF5 321 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 LAMTOR3Q9UHA4 124 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 KLF15Q9UIH9 416 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 FBXL3Q9UKT7 428 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 A0A087WWV3 80 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 FOXO6A8MYZ6 492 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ANHXE9PGG2 379 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 BLOC1S5-TXNDC5H3BN57 136 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 HYAL3O43820 417 aaPredicted RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 SLC37A4O43826 429 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 PTP4A3O75365 173 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 PAGE1O75459 146 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ATP1B1P05026 303 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 CT45A10P0DMU9 189 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 COX5AP20674 150 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 EDNRBP24530 442 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 GIFP27352 417 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 OTX2P32243 289 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 SSTR3P32745 418 aaPredicted RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 OR1D4P47884 311 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 RIPPLY3P57055 190 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 OR4D2P58180 307 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 WDR5P61964 334 aaKnown RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 PPP2CBP62714 309 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 CTBSQ01459 385 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ARL16Q0P5N6 197 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 TMEM267Q0VDI3 215 aaPredicted RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 CRMP1Q14194 572 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ACKR1Q16570 336 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 ECM1Q16610 540 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 PLPPR5Q32ZL2 321 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 TRMT12Q53H54 448 aaKnown RBP3.33□□□□□ -1.88
USP53-205ENST00000509769 NSUN5P2Q63ZY6 315 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 GLB1LQ6UWU2 654 aa3.33□□□□□ -1.88
USP53-205ENST00000509769 LIPIQ6XZB0 460 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms