RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 C6orf203Q9P0P8 240 aaPredicted RBP6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 MALT1Q9UDY8 824 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 KCNN3Q9UGI6 736 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 ADAM21Q9UKJ8 722 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 SLC7A7Q9UM01 511 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 TRAPPC4Q9Y296 219 aa6.35□□□□□ -1.39
TOPBP1-207ENST00000509162 HIVEP1P15822 2718 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 TRAV36DV7A0A075B6V5 113 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 SH3D21A4FU49 640 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 TMEM247A6NEH6 219 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 A6NNC1 897 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 ENO4A6NNW6 628 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 MS4A18H0YCH9 400 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 UPK3AO75631 287 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 LYZL6O75951 148 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 PRKD3O94806 890 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 ZNF432O94892 652 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 AHSA1O95433 338 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 PLAUP00749 431 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 YES1P07947 543 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 HSD17B1P14061 328 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 POU2F1P14859 743 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 PSMB1P20618 241 aaKnown RBP6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 CXCR1P25024 350 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 YAP1P46937 504 aaKnown RBP6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 PCYT1AP49585 367 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 CLK1P49759 484 aaKnown RBP6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 CSNK2A1P68400 391 aaPredicted RBP6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 SPOCK1Q08629 439 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 RNPS1Q15287 305 aaKnown RBP6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 SF3B4Q15427 424 aaKnown RBP eCLIP6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 ZNF74Q16587 644 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 ZSWIM7Q19AV6 140 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 MS4A18Q3C1V0 323 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 ZNF613Q6PF04 617 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 DEF8Q6ZN54 512 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 CHMP1BQ7LBR1 199 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 MYPOPQ86VE0 399 aaPredicted RBP6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 SLC30A8Q8IWU4 369 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 TMEM123Q8N131 208 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 MFSD8Q8NHS3 518 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 PIGXQ8TBF5 258 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 IGFBPL1Q8WX77 278 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 TMEM45BQ96B21 275 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 S100PBPQ96BU1 408 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 SLC7A6OSQ96CW6 309 aaPredicted RBP6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 DDIT4LQ96D03 193 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 RCC1LQ96I51 464 aaKnown RBP6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 ALKBH3Q96Q83 286 aaPredicted RBP6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 KCTD14Q9BQ13 255 aaPredicted RBP6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 TMEM43Q9BTV4 400 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 SPATA5L1Q9BVQ7 753 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 KRTAP4-7Q9BYR0 210 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 PRRG4Q9BZD6 226 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 TRIM2Q9C040 744 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 PLEKHF2Q9H8W4 249 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 SEC61A2Q9H9S3 476 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 EFCAB1Q9HAE3 211 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 NOX3Q9HBY0 568 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 GP6Q9HCN6 339 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 SPAG4Q9NPE6 437 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 SERINC1Q9NRX5 453 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 VNN3Q9NY84 501 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 KLHL9Q9P2J3 617 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 RHCGQ9UBD6 479 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 SH3GLB1Q9Y371 365 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 EMC9Q9Y3B6 208 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 SPIN1Q9Y657 262 aaPredicted RBP6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 V9GYQ6 96 aa6.34□□□□□ -1.39
TOPBP1-207ENST00000509162 PRRC2AP48634 2157 aaKnown RBP6.34□□□□□ -1.4
TOPBP1-207ENST00000509162 ROS1P08922 2347 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 CADP27708 2225 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 ALPK2Q86TB3 2170 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 TRAPPC13A5PLN9 417 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 SERPINB7O75635 380 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 DCTN3O75935 186 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 DNAJC8O75937 253 aaPredicted RBP6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 DIRAS1O95057 198 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 OR5F1O95221 314 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 PLGP00747 810 aaPredicted RBP6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 ADAP00813 363 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 TSPAN19P0C672 248 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 ASAH2BP0C7U1 165 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 TCN1P20061 433 aaPredicted RBP6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 MAKP20794 623 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 CRYGSP22914 178 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 KIR2DL3P43628 341 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 CTBP2P56545 445 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 FXYD6P3P58550 94 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 SUMO1P63165 101 aaKnown RBP6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 SELENOWP63302 87 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 SLC35A1P78382 337 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 MS4A2Q01362 244 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 RUNX1T1Q06455 604 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 DBPQ10586 325 aaPredicted RBP6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 DAZAP2Q15038 168 aaPredicted RBP6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 SEC23BQ15437 767 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 TAB1Q15750 504 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 PDSS1Q5T2R2 415 aa6.33□□□□□ -1.4
TOPBP1-207ENST00000509162 FAM69AQ5T7M9 428 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms