RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 SPDYAQ5MJ70 313 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 PDZK1Q5T2W1 519 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 SLC35E4Q6ICL7 350 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 LETMD1Q6P1Q0 360 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 C6orf89Q6UWU4 347 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 CCDC36Q8IYA8 594 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 FBXO36Q8NEA4 188 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 RHEBL1Q8TAI7 183 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 RAB40AQ8WXH6 277 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 C11orf40Q8WZ69 217 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 CIDECQ96AQ7 238 aaPredicted RBP6.03□□□□□ -1.44
VCAN-207ENST00000507162 DDIT4LQ96D03 193 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 ZNF837Q96EG3 531 aaPredicted RBP6.03□□□□□ -1.44
VCAN-207ENST00000507162 PCGF1Q9BSM1 259 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 SF3B5Q9BWJ5 86 aaKnown RBP6.03□□□□□ -1.44
VCAN-207ENST00000507162 IQCGQ9H095 443 aaKnown RBP6.03□□□□□ -1.44
VCAN-207ENST00000507162 DPAGT1Q9H3H5 408 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 GPR35Q9HC97 309 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 DCAF16Q9NXF7 216 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 TAS2R7Q9NYW3 318 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.03□□□□□ -1.44
VCAN-207ENST00000507162 RPUSD1Q9UJJ7 312 aaKnown RBP6.03□□□□□ -1.44
VCAN-207ENST00000507162 KCNE3Q9Y6H6 103 aa6.03□□□□□ -1.44
VCAN-207ENST00000507162 DSPPQ9NZW4 1301 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 TMED7-TICAM2A0A0A6YYA0 188 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 TMEM72A0PK05 275 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 UBOX5O94941 541 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 OR4F21O95013 312 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 OTCP00480 354 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 IGHV2-70P01814 119 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 OR12D1P0DN82 309 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 ZNF14P17017 642 aaPredicted RBP6.02□□□□□ -1.45
VCAN-207ENST00000507162 EFNA1P20827 205 aaPredicted RBP6.02□□□□□ -1.45
VCAN-207ENST00000507162 UQCRC2P22695 453 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 CRABP2P29373 138 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 SPRP35270 261 aaPredicted RBP6.02□□□□□ -1.45
VCAN-207ENST00000507162 IER3P46695 156 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 ZNF81P51508 661 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 CDH13P55290 713 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 ERVS71-1P61550 626 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 ZNF763Q0D2J5 394 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 PDIA2Q13087 525 aaKnown RBP6.02□□□□□ -1.45
VCAN-207ENST00000507162 SKP2Q13309 424 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 LASP1Q14847 261 aaKnown RBP6.02□□□□□ -1.45
VCAN-207ENST00000507162 RAB39AQ14964 217 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 GPR68Q15743 365 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 MOGQ16653 247 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 FAM83EQ2M2I3 478 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 SPIN4Q56A73 249 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 DCST2Q5T1A1 773 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 ZFAND6Q6FIF0 208 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 FAM71E1Q6IPT2 247 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 ANKRD26P1Q6NSI1 321 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 FRRS1Q6ZNA5 592 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 C1orf122Q6ZSJ8 110 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 CREB3L2Q70SY1 520 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 GPR137CQ8N3F9 429 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 OR4F17Q8NGA8 305 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 CFHR4Q92496 578 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 CDKL2Q92772 493 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 PMM1Q92871 262 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 CCDC126Q96EE4 140 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 GPR78Q96P69 363 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 MS4A4EQ96PG1 132 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 OR4F4Q96R69 305 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 CPNE1Q99829 537 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 ASCL2Q99929 193 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 SSBP3Q9BWW4 388 aaPredicted RBP6.02□□□□□ -1.45
VCAN-207ENST00000507162 EGLN1Q9GZT9 426 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 B3GNT2Q9NY97 397 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 KIF17Q9P2E2 1029 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 SLC7A8Q9UHI5 535 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 PCTPQ9UKL6 214 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 TMED7Q9Y3B3 224 aa6.02□□□□□ -1.45
VCAN-207ENST00000507162 IGHV2-70DA0A0C4DH43 119 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 A8MXK9 166 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 POC1B-GALNT4F8VUJ3 575 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 TNFRSF13BO14836 293 aaPredicted RBP6.01□□□□□ -1.45
VCAN-207ENST00000507162 PDPK1O15530 556 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 MGRN1O60291 552 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 RAB36O95755 333 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 IGHV1-46P01743 117 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 KRT6AP02538 564 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 KRT6BP04259 564 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 GPIP06744 558 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 CHRM4P08173 479 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 VSIG10L2P0DP72 767 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 THRBP10828 461 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 HSD3B1P14060 373 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 LMO1P25800 156 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 HSD3B2P26439 372 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 HOXD3P31249 432 aaPredicted RBP6.01□□□□□ -1.45
VCAN-207ENST00000507162 TGFBR2P37173 567 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 GIPRP48546 466 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 KRT6CP48668 564 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 IDH2P48735 452 aaKnown RBP6.01□□□□□ -1.45
VCAN-207ENST00000507162 AQP5P55064 265 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 ARL4CP56559 192 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 CLDN17P56750 224 aa6.01□□□□□ -1.45
VCAN-207ENST00000507162 RAB1AP62820 205 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms