RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 GSC2O15499 205 aa16.04■□□□□ 0.16
NPHP4-210ENST00000506941 ZNF432O94892 652 aa16.04■□□□□ 0.16
NPHP4-210ENST00000506941 CNOT4O95628 575 aaKnown RBP16.04■□□□□ 0.16
NPHP4-210ENST00000506941 FABP3P05413 133 aa16.04■□□□□ 0.16
NPHP4-210ENST00000506941 H1F0P07305 194 aaKnown RBP16.04■□□□□ 0.16
NPHP4-210ENST00000506941 ADORA3P0DMS8 318 aa16.04■□□□□ 0.16
NPHP4-210ENST00000506941 UMPSP11172 480 aa16.04■□□□□ 0.16
NPHP4-210ENST00000506941 FUT1P19526 365 aa16.04■□□□□ 0.16
NPHP4-210ENST00000506941 POU3F1Q03052 451 aaPredicted RBP16.04■□□□□ 0.16
NPHP4-210ENST00000506941 DGCR6Q14129 220 aa16.04■□□□□ 0.16
NPHP4-210ENST00000506941 P2RY6Q15077 328 aa16.04■□□□□ 0.16
NPHP4-210ENST00000506941 SFRP5Q5T4F7 317 aa16.04■□□□□ 0.16
NPHP4-210ENST00000506941 UEVLDQ8IX04 471 aa16.04■□□□□ 0.16
NPHP4-210ENST00000506941 UBE2J2Q8N2K1 259 aa16.04■□□□□ 0.16
NPHP4-210ENST00000506941 LIPHQ8WWY8 451 aa16.04■□□□□ 0.16
NPHP4-210ENST00000506941 ACOT11Q8WXI4 607 aaPredicted RBP16.04■□□□□ 0.16
NPHP4-210ENST00000506941 BPIFA2Q96DR5 249 aa16.04■□□□□ 0.16
NPHP4-210ENST00000506941 FUZQ9BT04 418 aa16.04■□□□□ 0.16
NPHP4-210ENST00000506941 ANKRD19PQ9H560 264 aa16.04■□□□□ 0.16
NPHP4-210ENST00000506941 SLC24A3Q9HC58 644 aa16.04■□□□□ 0.16
NPHP4-210ENST00000506941 FANCFQ9NPI8 374 aa16.04■□□□□ 0.16
NPHP4-210ENST00000506941 FAM32AQ9Y421 112 aaKnown RBP16.04■□□□□ 0.16
NPHP4-210ENST00000506941 TRBV4-1A0A0J9YWV2 114 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 PDLIM1O00151 329 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 LYZL6O75951 148 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 THBDP07204 575 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 EPXP11678 715 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 IFI30P13284 250 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 ITGA2P17301 1181 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 MAKP20794 623 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 AHCYP23526 432 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 CBX1P83916 185 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 PRKCDQ05655 676 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 ZP4Q12836 540 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 FAPQ12884 760 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 TRAP1Q12931 704 aaKnown RBP16.03■□□□□ 0.16
NPHP4-210ENST00000506941 ITGADQ13349 1161 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 C1DQ13901 141 aaKnown RBP16.03■□□□□ 0.16
NPHP4-210ENST00000506941 SEC23BQ15437 767 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 FGD3Q5JSP0 725 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 NIPAL3Q6P499 406 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 PODNL1Q6PEZ8 512 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 ZNF730Q6ZMV8 503 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 MBOAT2Q6ZWT7 520 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 NANOGNBQ7Z5D8 188 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 PXKQ7Z7A4 578 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 ZDHHC21Q8IVQ6 265 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 ZNF433Q8N7K0 673 aaPredicted RBP16.03■□□□□ 0.16
NPHP4-210ENST00000506941 MCUR1Q96AQ8 359 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 C14orf79Q96F83 325 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 DACH2Q96NX9 599 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 ACTR6Q9GZN1 396 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 SLCO5A1Q9H2Y9 848 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 NDRG3Q9UGV2 375 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 GPR52Q9Y2T5 361 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 NOX1Q9Y5S8 564 aa16.03■□□□□ 0.16
NPHP4-210ENST00000506941 ANKRD17O75179 2603 aaKnown RBP16.02■□□□□ 0.16
NPHP4-210ENST00000506941 SERPINI2O75830 405 aa16.02■□□□□ 0.16
NPHP4-210ENST00000506941 ATP5HO75947 161 aa16.02■□□□□ 0.16
NPHP4-210ENST00000506941 ITGA5P08648 1049 aa16.02■□□□□ 0.16
NPHP4-210ENST00000506941 TSPAN19P0C672 248 aa16.02■□□□□ 0.16
NPHP4-210ENST00000506941 MAGEA2P43356 314 aa16.02■□□□□ 0.16
NPHP4-210ENST00000506941 TLE4Q04727 773 aa16.02■□□□□ 0.16
NPHP4-210ENST00000506941 RPL18Q07020 188 aaKnown RBP16.02■□□□□ 0.16
NPHP4-210ENST00000506941 LINGO2Q7L985 606 aa16.02■□□□□ 0.16
NPHP4-210ENST00000506941 BHLHA15Q7RTS1 189 aaPredicted RBP16.02■□□□□ 0.16
NPHP4-210ENST00000506941 PIWIL3Q7Z3Z3 882 aaKnown RBP16.02■□□□□ 0.16
NPHP4-210ENST00000506941 RNF113BQ8IZP6 322 aaKnown RBP16.02■□□□□ 0.16
NPHP4-210ENST00000506941 TMEM123Q8N131 208 aa16.02■□□□□ 0.16
NPHP4-210ENST00000506941 OR52J3Q8NH60 311 aa16.02■□□□□ 0.16
NPHP4-210ENST00000506941 KISS1RQ969F8 398 aaPredicted RBP16.02■□□□□ 0.16
NPHP4-210ENST00000506941 S100PBPQ96BU1 408 aa16.02■□□□□ 0.16
NPHP4-210ENST00000506941 TXNDC15Q96J42 360 aa16.02■□□□□ 0.16
NPHP4-210ENST00000506941 OR2M2Q96R28 347 aa16.02■□□□□ 0.16
NPHP4-210ENST00000506941 MED18Q9BUE0 208 aa16.02■□□□□ 0.16
NPHP4-210ENST00000506941 ASB6Q9NWX5 421 aa16.02■□□□□ 0.16
NPHP4-210ENST00000506941 MED29Q9NX70 200 aa16.02■□□□□ 0.16
NPHP4-210ENST00000506941 RCE1Q9Y256 329 aa16.02■□□□□ 0.16
NPHP4-210ENST00000506941 POLQO75417 2590 aa16.02■□□□□ 0.15
NPHP4-210ENST00000506941 TEX15Q9BXT5 2789 aa16.02■□□□□ 0.15
NPHP4-210ENST00000506941 BLOC1S5-TXNDC5H3BN57 136 aa16.01■□□□□ 0.15
NPHP4-210ENST00000506941 SIAH2O43255 324 aa16.01■□□□□ 0.15
NPHP4-210ENST00000506941 RNF13O43567 381 aa16.01■□□□□ 0.15
NPHP4-210ENST00000506941 UPK3AO75631 287 aa16.01■□□□□ 0.15
NPHP4-210ENST00000506941 OR6A2O95222 327 aa16.01■□□□□ 0.15
NPHP4-210ENST00000506941 HIST1H2ABP04908 130 aa16.01■□□□□ 0.15
NPHP4-210ENST00000506941 SSTR2P30874 369 aa16.01■□□□□ 0.15
NPHP4-210ENST00000506941 DNAJA1P31689 397 aaKnown RBP16.01■□□□□ 0.15
NPHP4-210ENST00000506941 GPR4P46093 362 aa16.01■□□□□ 0.15
NPHP4-210ENST00000506941 SPIBQ01892 262 aa16.01■□□□□ 0.15
NPHP4-210ENST00000506941 FHL1Q13642 323 aa16.01■□□□□ 0.15
NPHP4-210ENST00000506941 DAZAP2Q15038 168 aaPredicted RBP16.01■□□□□ 0.15
NPHP4-210ENST00000506941 HIST3H2AQ7L7L0 130 aa16.01■□□□□ 0.15
NPHP4-210ENST00000506941 STEAP2Q8NFT2 490 aa16.01■□□□□ 0.15
NPHP4-210ENST00000506941 MOSPD2Q8NHP6 518 aa16.01■□□□□ 0.15
NPHP4-210ENST00000506941 HIST1H2ACQ93077 130 aa16.01■□□□□ 0.15
NPHP4-210ENST00000506941 ZC3HAV1LQ96H79 300 aaKnown RBP16.01■□□□□ 0.15
NPHP4-210ENST00000506941 LRGUKQ96M69 825 aa16.01■□□□□ 0.15
NPHP4-210ENST00000506941 ALKBH3Q96Q83 286 aaPredicted RBP16.01■□□□□ 0.15
NPHP4-210ENST00000506941 EMC6Q9BV81 110 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms