RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 ABCA4P78363 2273 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 ENO4A6NNW6 628 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 SHISA8B8ZZ34 492 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 M0R082 166 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 M0R3G1 203 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 TNFRSF11BO00300 401 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 ARPC3O15145 178 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 KLF4O43474 513 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 SLC43A1O75387 559 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 WISP2O76076 250 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 THY1P04216 161 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 NQO1P15559 274 aaKnown RBP7.52□□□□□ -1.21
PDGFC-205ENST00000506880 IGFBP2P18065 325 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 FUT1P19526 365 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 COX5AP20674 150 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 SHC1P29353 583 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 GRPRP30550 384 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 CD79BP40259 229 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 ZNF133P52736 654 aaPredicted RBP7.52□□□□□ -1.21
PDGFC-205ENST00000506880 HOXC5Q00444 222 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 SPIBQ01892 262 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 TFF3Q07654 80 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 C1DQ13901 141 aaKnown RBP7.52□□□□□ -1.21
PDGFC-205ENST00000506880 MICAQ29983 383 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 ZBED5Q49AG3 693 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 FBXW9Q5XUX1 488 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 TFAP2EQ6VUC0 442 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 CYP2R1Q6VVX0 501 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 DPY19L2P2Q6ZN68 376 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 CREB3L2Q70SY1 520 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 SLC46A3Q7Z3Q1 461 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 TSEN54Q7Z6J9 526 aaKnown RBP7.52□□□□□ -1.21
PDGFC-205ENST00000506880 HMGN2P46Q86SG4 172 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 ADCK1Q86TW2 530 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 OAFQ86UD1 273 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 RBM45Q8IUH3 476 aaKnown RBP7.52□□□□□ -1.21
PDGFC-205ENST00000506880 ATP6V1C2Q8NEY4 427 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 OR4K5Q8NGD3 323 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 ZNF417Q8TAU3 575 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 RNF217Q8TC41 542 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 GNPDA2Q8TDQ7 276 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 FAM222BQ8WU58 562 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 ABHD3Q8WU67 409 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 TMEM255BQ8WV15 326 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 CANT1Q8WVQ1 401 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 CENPNQ96H22 339 aaPredicted RBP7.52□□□□□ -1.21
PDGFC-205ENST00000506880 DACH2Q96NX9 599 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 PSMG3-AS1Q96PY0 264 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 ZNF587Q96SQ5 575 aaPredicted RBP7.52□□□□□ -1.21
PDGFC-205ENST00000506880 SEPHS2Q99611 448 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 NPAS1Q99742 590 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 KLHDC3Q9BQ90 382 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 WFDC6Q9BQY6 131 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 ALG12Q9BV10 488 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 ENKD1Q9H0I2 346 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 SLCO5A1Q9H2Y9 848 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 TXNIPQ9H3M7 391 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 TAS2R16Q9NYV7 291 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 KCNN3Q9UGI6 736 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 NDRG3Q9UGV2 375 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 SAMHD1Q9Y3Z3 626 aaKnown RBP7.52□□□□□ -1.21
PDGFC-205ENST00000506880 AP4S1Q9Y587 144 aa7.52□□□□□ -1.21
PDGFC-205ENST00000506880 EFCAB9A8MZ26 197 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 GNGT2O14610 69 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 CLOCKO15516 846 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 ZG16O60844 167 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 TMCC2O75069 709 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 ZNF432O94892 652 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 CCNB2O95067 398 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 AKR7A3O95154 331 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 NDUFB2O95178 105 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 TXNDC12O95881 172 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 CH25HO95992 272 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 IGHG1P01857 330 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 ADORA3P0DMS8 318 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 SAGP10523 405 aaPredicted RBP7.51□□□□□ -1.21
PDGFC-205ENST00000506880 EPXP11678 715 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 IFI30P13284 250 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 MPGP29372 298 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 OMPP47874 163 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 GSSP48637 474 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 RPS6KA3P51812 740 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 UGT2B15P54855 530 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 ITGADQ13349 1161 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 ATP6AP1Q15904 470 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 RFX4Q33E94 735 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 FGD3Q5JSP0 725 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 ZNF770Q6IQ21 691 aaPredicted RBP7.51□□□□□ -1.21
PDGFC-205ENST00000506880 PODNL1Q6PEZ8 512 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 SHQ1Q6PI26 577 aaKnown RBP7.51□□□□□ -1.21
PDGFC-205ENST00000506880 NHLRC1Q6VVB1 395 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 WDR88Q6ZMY6 472 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 RASSF6Q6ZTQ3 369 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 NKAIN4Q8IVV8 208 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 NRMQ8IXM6 262 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 ZNF100Q8IYN0 542 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 GABRG1Q8N1C3 465 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 PARP8Q8N3A8 854 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 C10orf53Q8N6V4 93 aa7.51□□□□□ -1.21
PDGFC-205ENST00000506880 TMEM99Q8N816 258 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms