RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 CTNNB1P35222 781 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 RBM34P42696 430 aaKnown RBP14.57□□□□□ -0.08
SCLT1-208ENST00000506368 FNTBP49356 437 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 PDX1P52945 283 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 BLOC1S1P78537 153 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 MELKQ14680 651 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 ABHD13Q7L211 337 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 ZNF227Q86WZ6 799 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 SAMD14Q8IZD0 417 aaPredicted RBP14.57□□□□□ -0.08
SCLT1-208ENST00000506368 OR2L13Q8N349 312 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 CNTNAP3BQ96NU0 1288 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 MS4A4EQ96PG1 132 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 ZNF471Q9BX82 626 aaPredicted RBP14.57□□□□□ -0.08
SCLT1-208ENST00000506368 VN1R3Q9BXE9 311 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 POT1Q9NUX5 634 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 GNG8Q9UK08 70 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 MAFFQ9ULX9 164 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 NTNG1Q9Y2I2 539 aa14.57□□□□□ -0.08
SCLT1-208ENST00000506368 SGCEO43556 437 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 LEFTY1O75610 366 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 POP7O75817 140 aaKnown RBP14.56□□□□□ -0.08
SCLT1-208ENST00000506368 EIF3GO75821 320 aaKnown RBP eCLIP14.56□□□□□ -0.08
SCLT1-208ENST00000506368 GKN3PP0CG01 181 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 ST8SIA6P61647 398 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 NAAAQ02083 359 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 LTBQ06643 244 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 AGERQ15109 404 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 Q499Y3 187 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 H3F3CQ6NXT2 135 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 THSD4Q6ZMP0 1018 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 STAC2Q6ZMT1 411 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 IL17FQ96PD4 163 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 OR51M1Q9H341 326 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 CES1P1Q9UKY3 287 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 ZNF780BQ9Y6R6 833 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 COL6A3P12111 3177 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 OBSL1O75147 1896 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 ACAA1P09110 424 aaPredicted RBP14.56□□□□□ -0.08
SCLT1-208ENST00000506368 TACSTD2P09758 323 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 F3P13726 295 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 BDKRB2P30411 391 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 PON3Q15166 354 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 OR1Q1Q15612 314 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 FAM74A1Q5RGS3 127 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 LY6G6FQ5SQ64 297 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 ANKRD16Q6P6B7 361 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 TMEM88Q6PEY1 159 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 OR1S2Q8NGQ3 325 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 OR5K2Q8NHB8 316 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 ZNF558Q96NG5 402 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 VRK1Q99986 396 aaPredicted RBP14.56□□□□□ -0.08
SCLT1-208ENST00000506368 LGR4Q9BXB1 951 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 NCDNQ9UBB6 729 aa14.56□□□□□ -0.08
SCLT1-208ENST00000506368 SPTBN5Q9NRC6 3674 aaKnown RBP14.55□□□□□ -0.08
SCLT1-208ENST00000506368 C5orf42Q9H799 3197 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 OR6C68A6NDL8 312 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 LINC00587B1AMM8 73 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 SSX5O60225 188 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 EIF1BO60739 113 aaKnown RBP14.55□□□□□ -0.08
SCLT1-208ENST00000506368 LYPD3O95274 346 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 CRYBA1P05813 215 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 OR4E1P0C645 316 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 ABOP16442 354 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 RPS4Y1P22090 263 aaKnown RBP14.55□□□□□ -0.08
SCLT1-208ENST00000506368 HIST1H1TP22492 207 aaPredicted RBP14.55□□□□□ -0.08
SCLT1-208ENST00000506368 ITPKBP27987 946 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 EIF1P41567 113 aaKnown RBP14.55□□□□□ -0.08
SCLT1-208ENST00000506368 MC3RP41968 323 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 HAAOP46952 286 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 TAS2R19P59542 299 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 ECH1Q13011 328 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 SERTAD2Q14140 314 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 SMAD2Q15796 467 aaKnown RBP14.55□□□□□ -0.08
SCLT1-208ENST00000506368 ZIC1Q15915 447 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 TXNDC8Q6A555 127 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 SLC39A11Q8N1S5 342 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 OR13C2Q8NGS9 318 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 RNF141Q8WVD5 230 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 SLC35A4Q96G79 324 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 IGSF21Q96ID5 467 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 PDCD1LG2Q9BQ51 273 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 OR2AG1Q9H205 316 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 SLCO5A1Q9H2Y9 848 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 C20orf141Q9NUB4 165 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 TMEM100Q9NV29 134 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 ATG2AQ2TAZ0 1938 aa14.55□□□□□ -0.08
SCLT1-208ENST00000506368 GGT3PA6NGU5 568 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 WRBO00258 174 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 UBE2CO00762 179 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 FCMRO60667 390 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 LAMP2P13473 410 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 GTF2F2P13984 249 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 DIO1P49895 249 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 CSNK1G2P78368 415 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 RAB30Q15771 203 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 RNF212Q495C1 297 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 CDNFQ49AH0 187 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 RAB12Q6IQ22 244 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 MFSD12Q6NUT3 480 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 ZNF793Q6ZN11 406 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms