RNA–Protein interactions for RNA: ENST00000505804.1

TOPBP1-204, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 472 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-204ENST00000505804 DEFB127Q9H1M4 99 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 GBA3Q9H227 469 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 GNPTGQ9UJJ9 305 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 ADAM28Q9UKQ2 775 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 CLEC4AQ9UMR7 237 aa2.5□□□□□ -2.01
TOPBP1-204ENST00000505804 FANCIQ9NVI1 1328 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 LRP4O75096 1905 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 IGLV3-22A0A075B6J6 115 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 GPR89AB7ZAQ6 455 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 NBR2O15453 112 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 MAGEB4O15481 346 aaPredicted RBP2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 RIPK2O43353 540 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 DFNA5O60443 496 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 CAPN1P07384 714 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 GPR89BP0CG08 455 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 DBTP11182 482 aaKnown RBP2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 HPGDP15428 266 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 HOXA9P31269 272 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 SLC26A3P40879 764 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 OPRD1P41143 372 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 ARFIP1P53367 373 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 AIF1P55008 147 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 ACVR1Q04771 509 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 NCBP1Q09161 790 aaKnown RBP2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 GGTLC2Q14390 218 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 RSPO1Q2MKA7 263 aaPredicted RBP2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 RFX4Q33E94 735 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 PIGGQ5H8A4 983 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 LCE3AQ5TA76 89 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 ZNF691Q5VV52 312 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 KHDRBS2Q5VWX1 349 aaKnown RBP2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 LINC01551Q86U37 167 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 PLA2G4DQ86XP0 818 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 PIANPQ8IYJ0 282 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 CCDC54Q8NEL0 328 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 OR10G9Q8NGN4 311 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 DTX3LQ8TDB6 740 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 MCOLN3Q8TDD5 553 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 GIMAP1Q8WWP7 306 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 FGF14Q92915 247 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 PSKH2Q96QS6 385 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 PATZ1Q9HBE1 687 aaKnown RBP2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 LY9Q9HBG7 655 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 MCCC2Q9HCC0 563 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 DMAP1Q9NPF5 467 aaPredicted RBP2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 GLRX2Q9NS18 164 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 RBAKQ9NYW8 714 aaPredicted RBP2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 CALYQ9NYX4 217 aa2.49□□□□□ -2.01
TOPBP1-204ENST00000505804 COL4A4P53420 1690 aaPredicted RBP2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 A0A096LNJ9 63 aa2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 A0A1B0GVL5 298 aa2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 IL1BP01584 269 aa2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 ALDOBP05062 364 aa2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 ADRB3P13945 408 aa2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 PRPHP41219 470 aa2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 HNMTP50135 292 aa2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 GBX2P52951 348 aaPredicted RBP2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 HERVK_113P61574 105 aa2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 PAX5Q02548 391 aa2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 GPM6BQ13491 265 aa2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 EBI3Q14213 229 aa2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 LRRC23Q53EV4 343 aaPredicted RBP2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 UTS2BQ765I0 119 aa2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 PPP1R42Q7Z4L9 355 aa2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 NUDCD3Q8IVD9 361 aa2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 PYROXD1Q8WU10 500 aa2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 STARD4Q96DR4 205 aa2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 SLC41A3Q96GZ6 507 aa2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 CEP170P1Q96L14 293 aa2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 ZNF641Q96N77 438 aaPredicted RBP2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 PPA2Q9H2U2 334 aa2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 VCXQ9H320 206 aa2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 CDC42EP4Q9H3Q1 356 aaKnown RBP2.48□□□□□ -2.01
TOPBP1-204ENST00000505804 ASTN1O14525 1302 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 IGLV4-69A0A075B6H9 119 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 CCDC182A6NF36 153 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 RSPH10B2B2RC85 870 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 SLC31A2O15432 143 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 TIMM8AO60220 97 aaPredicted RBP2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 SS18L1O75177 396 aaPredicted RBP2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 SUPT3HO75486 399 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 CLDN9O95484 217 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 RSPH10BP0C881 870 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 RPS2P15880 293 aaKnown RBP2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 SLC2A5P22732 501 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 ERVK-25P63136 954 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 SCRN3Q0VDG4 424 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 FZD2Q14332 565 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 PTGES3Q15185 160 aaKnown RBP2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 TMEM183BQ1AE95 376 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 CNIH2Q6PI25 160 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 ENPP6Q6UWR7 440 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 ZFP2Q6ZN57 461 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 CAMK2N1Q7Z7J9 78 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 TMEM183AQ8IXX5 376 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 OR1N2Q8NGR9 330 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 OR2G3Q8NGZ4 309 aa2.47□□□□□ -2.01
TOPBP1-204ENST00000505804 ASB9Q96DX5 294 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms