RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 MED31Q9Y3C7 131 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 PCDHGB5Q9Y5G0 923 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 PCDHGA6Q9Y5G7 932 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 B3GALT1Q9Y5Z6 326 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 KNTC1P50748 2209 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 SPTBP11277 2137 aa4.81□□□□□ -1.64
HMGXB4-208ENST00000498325 IGHV1-45A0A0A0MS14 117 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 NSG1A0A0A6YYJ2 146 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 A0A0B4J2E0 115 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 CENPVL1A0A0U1RR11 272 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 A0A1B0GWA3 101 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 A0A1B0GX12 115 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 TRIM64A6NGJ6 449 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 UNC119BA6NIH7 251 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 TRIM64CA6NLI5 447 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 SNTNA6NMZ2 147 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 FAM90A27PA6NNH2 459 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 ALG1L2C9J202 215 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 SLC1A7O00341 560 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 TP53I11O14683 189 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 PRKNO60260 465 aaPredicted RBP4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 FADS1O60427 444 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 FAM20BO75063 409 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 ICOSLGO75144 302 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 KLF7O75840 302 aaPredicted RBP4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 THY1P04216 161 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 HMGN1P05114 100 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 TFAP2AP05549 437 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 UMODP07911 640 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 SMIM18P0DKX4 95 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 IFI30P13284 250 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 CRHBPP24387 322 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 FPR3P25089 353 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 ELK4P28324 431 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 RBMS1P29558 406 aaKnown RBP4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 ACAA2P42765 397 aaKnown RBP4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 OMPP47874 163 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 P2RX1P51575 399 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 CTBP2P56545 445 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 CD83Q01151 205 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 C17orf67Q0P5P2 114 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 APOFQ13790 326 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 CBFBQ13951 182 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 SNAPC1Q16533 368 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 BTBD16Q32M84 506 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 MEDAGQ5VYS4 303 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 SLX4IPQ5VYV7 408 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 PLAG1Q6DJT9 500 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 SLC27A4Q6P1M0 643 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 ZNF773Q6PK81 442 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 OPN5Q6U736 354 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 FAM198BQ6UWH4 519 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 TMPRSS11FQ6ZWK6 438 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 NDUFAF7Q7L592 441 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 ZNF554Q86TJ5 538 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 ADGRG3Q86Y34 549 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 ERI1Q8IV48 349 aaKnown RBP4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 NRMQ8IXM6 262 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 ENTHD1Q8IYW4 607 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 DND1Q8IYX4 353 aaKnown RBP4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 NLGN4XQ8N0W4 816 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 CYP4Z2PQ8N1L4 340 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 SLC43A2Q8N370 569 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 TMCO5AQ8N6Q1 288 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 ZNF540Q8NDQ6 660 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 FAM71CQ8NEG0 241 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 OR8J1Q8NGP2 316 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 RHOXF1Q8NHV9 184 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 ELP5Q8TE02 316 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 GRHL3Q8TE85 626 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 SLC25A43Q8WUT9 341 aaPredicted RBP4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 TMEM255BQ8WV15 326 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 MYDGFQ969H8 173 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 C8orf44Q96CB5 159 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 BPIFA2Q96DR5 249 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 SLC38A2Q96QD8 506 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 SLC19A3Q9BZV2 496 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 SPRY4Q9C004 299 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 RBM38Q9H0Z9 239 aaKnown RBP4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 C12orf10Q9HB07 376 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 PLGRKTQ9HBL7 147 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 SLC25A19Q9HC21 320 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 MMP25Q9NPA2 562 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 ZNF71Q9NQZ8 489 aaPredicted RBP4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 RASSF1Q9NS23 344 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 IL20Q9NYY1 176 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 FLRT3Q9NZU0 649 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 ZNF223Q9UK11 482 aaPredicted RBP4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 RNF6Q9Y252 685 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 CARD8Q9Y2G2 431 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 PCDHGB6Q9Y5F9 930 aa4.8□□□□□ -1.64
HMGXB4-208ENST00000498325 NBASA2RRP1 2371 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 NINQ8N4C6 2090 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 A0A087WUJ7 227 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 A0A1B0GVG6 124 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 A0A1W2PQ72 361 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 IRGMA1A4Y4 181 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 CLCA1A8K7I4 914 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 EFCAB9A8MZ26 197 aa4.79□□□□□ -1.64
HMGXB4-208ENST00000498325 C21orf140B9A014 251 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms