RNA–Protein interactions for RNA: ENST00000497791.5

UMPS-209, Transcript of uridine monophosphate synthetase, human

TSL 1 (best)

Gene UMPS, Length 1,691 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UMPS-209	ENST00000497791	KLHL17	Q6TDP4	642 aa		13.21	□□□□□ -0.3
UMPS-209	ENST00000497791	HIST3H2A	Q7L7L0	130 aa		13.21	□□□□□ -0.3
UMPS-209	ENST00000497791	NUFIP2	Q7Z417	695 aa	Known RBP	13.21	□□□□□ -0.3
UMPS-209	ENST00000497791	CCDC71	Q8IV32	467 aa	Predicted RBP	13.21	□□□□□ -0.3
UMPS-209	ENST00000497791	ADPRHL1	Q8NDY3	354 aa		13.21	□□□□□ -0.3
UMPS-209	ENST00000497791	OR8D4	Q8NGM9	314 aa		13.21	□□□□□ -0.3
UMPS-209	ENST00000497791	HIST1H2AC	Q93077	130 aa		13.21	□□□□□ -0.3
UMPS-209	ENST00000497791	NRBF2	Q96F24	287 aa		13.21	□□□□□ -0.3
UMPS-209	ENST00000497791	CCDC120	Q96HB5	630 aa		13.21	□□□□□ -0.3
UMPS-209	ENST00000497791	TXNDC15	Q96J42	360 aa		13.21	□□□□□ -0.3
UMPS-209	ENST00000497791	SLC29A1	Q99808	456 aa		13.21	□□□□□ -0.3
UMPS-209	ENST00000497791	MGAT4B	Q9UQ53	548 aa		13.21	□□□□□ -0.3
UMPS-209	ENST00000497791	HIF3A	Q9Y2N7	669 aa		13.21	□□□□□ -0.3
UMPS-209	ENST00000497791	FLVCR1	Q9Y5Y0	555 aa		13.21	□□□□□ -0.3
UMPS-209	ENST00000497791	NBPF19	A0A087WUL8	3843 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791		A0A1W2PNV4	684 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	MCIDAS	D6RGH6	385 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	RNF13	O43567	381 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	TRAF3IP2	O43734	574 aa	Predicted RBP	13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	MGRN1	O60291	552 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	TNFSF13	O75888	250 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	AGTR1	P30556	359 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	IFNGR2	P38484	337 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	KIR2DL2	P43627	348 aa	Predicted RBP	13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	SLC16A1	P53985	500 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	GK3P	Q14409	553 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	CDSN	Q15517	529 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	LPCAT4	Q643R3	524 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	ZNF620	Q6ZNG0	422 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	GALNT5	Q7Z7M9	940 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	HIPK1	Q86Z02	1210 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	ZDHHC13	Q8IUH4	622 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	LIX1L	Q8IVB5	337 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	SLC43A2	Q8N370	569 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	SVOPL	Q8N434	492 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	LINC00471	Q8N535	108 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	ATG16L2	Q8NAA4	619 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	GABARAPL1	Q9H0R8	117 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	BCO1	Q9HAY6	547 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	MED29	Q9NX70	200 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	STX18	Q9P2W9	335 aa	Known RBP	13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	REV1	Q9UBZ9	1251 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	TMEFF2	Q9UIK5	374 aa	Predicted RBP	13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	ERRFI1	Q9UJM3	462 aa	Predicted RBP	13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	RASD1	Q9Y272	281 aa		13.2	□□□□□ -0.3
UMPS-209	ENST00000497791	IGKV3D-15	A0A087WSY6	115 aa		13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	ADA	P00813	363 aa		13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	TMIGD3	P0DMS9	266 aa	Predicted RBP	13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	FCGR2A	P12318	317 aa		13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	SLC9A3	P48764	834 aa		13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	PER3	P56645	1201 aa		13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	POU3F1	Q03052	451 aa	Predicted RBP	13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	ZP4	Q12836	540 aa		13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	MELK	Q14680	651 aa		13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	RNPS1	Q15287	305 aa	Known RBP	13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	SF3B4	Q15427	424 aa	Known RBP eCLIP	13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	LRRC36	Q1X8D7	754 aa		13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	C4orf17	Q53FE4	359 aa		13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	EEF1A1P5	Q5VTE0	462 aa		13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	CREB3L2	Q70SY1	520 aa		13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	CBR4	Q8N4T8	237 aa		13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	CNEP1R1	Q8N9A8	125 aa		13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	FANK1	Q8TC84	345 aa		13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	SAMD8	Q96LT4	415 aa		13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	OXGR1	Q96P68	337 aa		13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	TM9SF2	Q99805	663 aa		13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	EMC6	Q9BV81	110 aa		13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	UCK2	Q9BZX2	261 aa		13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	DCLRE1B	Q9H816	532 aa		13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	KRCC1	Q9NPI7	259 aa	Predicted RBP	13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	KLHL9	Q9P2J3	617 aa		13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	ADAM18	Q9Y3Q7	739 aa		13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	USP9Y	O00507	2555 aa	Predicted RBP	13.19	□□□□□ -0.3
UMPS-209	ENST00000497791	HTR3E	A5X5Y0	456 aa		13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	EI24	O14681	340 aa		13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	SS18L1	O75177	396 aa	Predicted RBP	13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	OR6A2	O95222	327 aa		13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	IL2RA	P01589	272 aa		13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	RNF224	P0DH78	156 aa		13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	PEX2	P28328	305 aa		13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	PPP2R2B	Q00005	443 aa		13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	SRSF1	Q07955	248 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	LGALS3BP	Q08380	585 aa		13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	DBP	Q10586	325 aa	Predicted RBP	13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	ALG10	Q5BKT4	473 aa		13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	RIPPLY2	Q5TAB7	128 aa		13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	KDM4D	Q6B0I6	523 aa		13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	BTLA	Q7Z6A9	289 aa		13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	MCEMP1	Q8IX19	187 aa		13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	GMPPA	Q96IJ6	420 aa	Predicted RBP	13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	OR52D1	Q9H346	318 aa		13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	C12orf49	Q9H741	205 aa		13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	RNPEPL1	Q9HAU8	725 aa		13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	FANCF	Q9NPI8	374 aa		13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	KIF17	Q9P2E2	1029 aa		13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	RNF6	Q9Y252	685 aa		13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	HAX1	O00165	279 aa		13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	YES1	P07947	543 aa		13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	IFNGR1	P15260	489 aa		13.18	□□□□□ -0.3
UMPS-209	ENST00000497791	ZNF43	P17038	809 aa		13.18	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms