RNA–Protein interactions for RNA: ENST00000497149.1

VPS36-206, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 3

Gene VPS36, Length 364 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-206ENST00000497149 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.1□□□□□ -1.91
VPS36-206ENST00000497149 ZNF641Q96N77 438 aaPredicted RBP3.1□□□□□ -1.91
VPS36-206ENST00000497149 ZNF285Q96NJ3 590 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 NPY6RQ99463 290 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 ZBTB18Q99592 522 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 PAIP2Q9BPZ3 127 aaKnown RBP3.1□□□□□ -1.91
VPS36-206ENST00000497149 GBA3Q9H227 469 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 NIPAL2Q9H841 368 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 SIAEQ9HAT2 523 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 LY9Q9HBG7 655 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 SGK2Q9HBY8 427 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 CCL28Q9NRJ3 127 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 GLRX2Q9NS18 164 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 PRG3Q9Y2Y8 225 aaPredicted RBP3.1□□□□□ -1.91
VPS36-206ENST00000497149 SLC25A15Q9Y619 301 aa3.1□□□□□ -1.91
VPS36-206ENST00000497149 KIR2DL5BA0A0G2JN68 375 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 KIR2DL5BA0A0G2JPC4 375 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 NKX2-6A6NCS4 301 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 CCDC182A6NF36 153 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 FAM166BA8MTA8 275 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 C12orf77C9JDV5 145 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 IGHDP01880 384 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 MMP1P03956 469 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 TOP1P11387 765 aaKnown RBP3.09□□□□□ -1.91
VPS36-206ENST00000497149 TDGF1P13385 188 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 CD1CP29017 333 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 TDGF1P3P51864 188 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 SEC61GP60059 68 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 SCRN3Q0VDG4 424 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 GNMTQ14749 295 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 ZNF429Q86V71 674 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 PIANPQ8IYJ0 282 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 KIR2DL5AQ8N109 375 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 ARIH2OSQ8N7S6 290 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 NPBQ8NG41 125 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 OR6X1Q8NH79 312 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 KIR2DL5BQ8NHK3 375 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 PYROXD1Q8WU10 500 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 SRSF12Q8WXF0 261 aaKnown RBP3.09□□□□□ -1.91
VPS36-206ENST00000497149 FGF14Q92915 247 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 RNF185Q96GF1 192 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 RIOK1Q9BRS2 568 aaKnown RBP3.09□□□□□ -1.91
VPS36-206ENST00000497149 PELOQ9BRX2 385 aaKnown RBP3.09□□□□□ -1.91
VPS36-206ENST00000497149 TRIM62Q9BVG3 475 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 FAIM2Q9BWQ8 316 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 DEFB127Q9H1M4 99 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 PPA2Q9H2U2 334 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 SRMSQ9H3Y6 488 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 AZI2Q9H6S1 392 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 RANBP3Q9H6Z4 567 aaPredicted RBP3.09□□□□□ -1.91
VPS36-206ENST00000497149 NUFIP1Q9UHK0 495 aaKnown RBP3.09□□□□□ -1.91
VPS36-206ENST00000497149 MMP17Q9ULZ9 603 aa3.09□□□□□ -1.91
VPS36-206ENST00000497149 TRBV6-6A0A0A6YYG2 114 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 C12orf71A8MTZ7 269 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 FOXE1O00358 373 aaPredicted RBP3.08□□□□□ -1.92
VPS36-206ENST00000497149 B4GALT2O60909 372 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 HOXC4P09017 264 aaPredicted RBP3.08□□□□□ -1.92
VPS36-206ENST00000497149 EPS15P42566 896 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 ERVK-25P63136 954 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 KIAA0087Q14695 138 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 CYTH1Q15438 398 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 FRMPD2BQ6IN97 320 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 KDELC1Q6UW63 502 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 TPRX1Q8N7U7 411 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 Q8N9L7 120 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 MDS2Q8NDY4 140 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 OR10G9Q8NGN4 311 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 ACER1Q8TDN7 264 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 IL22RA2Q969J5 263 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 FAM104AQ969W3 186 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 TCEANC2Q96MN5 208 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 CNN2Q99439 309 aaKnown RBP3.08□□□□□ -1.92
VPS36-206ENST00000497149 FMO2Q99518 471 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 SLC25A39Q9BZJ4 359 aaPredicted RBP3.08□□□□□ -1.92
VPS36-206ENST00000497149 ANKRD19PQ9H560 264 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 NMRAL1Q9HBL8 299 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 HYPKQ9NX55 129 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 CALYQ9NYX4 217 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 SLC25A37Q9NYZ2 338 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 ZNF639Q9UID6 485 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 RRP15Q9Y3B9 282 aaKnown RBP3.08□□□□□ -1.92
VPS36-206ENST00000497149 N6AMT1Q9Y5N5 214 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 NPTNQ9Y639 398 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 KANK1Q14678 1352 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 PDS5BQ9NTI5 1447 aa3.08□□□□□ -1.92
VPS36-206ENST00000497149 IGLV3-22A0A075B6J6 115 aa3.07□□□□□ -1.92
VPS36-206ENST00000497149 FAM240BA0A1B0GVZ2 78 aa3.07□□□□□ -1.92
VPS36-206ENST00000497149 OR52A4PA6NMU1 304 aa3.07□□□□□ -1.92
VPS36-206ENST00000497149 HAS3O00219 553 aa3.07□□□□□ -1.92
VPS36-206ENST00000497149 PCCAP05165 728 aaPredicted RBP3.07□□□□□ -1.92
VPS36-206ENST00000497149 HPGDP15428 266 aa3.07□□□□□ -1.92
VPS36-206ENST00000497149 UCNP55089 124 aa3.07□□□□□ -1.92
VPS36-206ENST00000497149 MRPL28Q13084 256 aaKnown RBP3.07□□□□□ -1.92
VPS36-206ENST00000497149 IMMTQ16891 758 aaKnown RBP3.07□□□□□ -1.92
VPS36-206ENST00000497149 LRRC10Q5BKY1 277 aa3.07□□□□□ -1.92
VPS36-206ENST00000497149 Q6P435 159 aa3.07□□□□□ -1.92
VPS36-206ENST00000497149 C16orf87Q6PH81 154 aa3.07□□□□□ -1.92
VPS36-206ENST00000497149 ZNF621Q6ZSS3 439 aa3.07□□□□□ -1.92
VPS36-206ENST00000497149 H2BFWTQ7Z2G1 175 aa3.07□□□□□ -1.92
VPS36-206ENST00000497149 ZNF606Q8WXB4 792 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms