RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 CCNB2O95067 398 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 FCGR1AP12314 374 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 GPR4P46093 362 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 OR3A2P47893 321 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 LIMS1P48059 325 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 ARHGDIAP52565 204 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 LSM11P83369 360 aaKnown RBP eCLIP15.18■□□□□ 0.02
HDAC6-235ENST00000495515 SEC23BQ15437 767 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 CDSNQ15517 529 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 MS4A18Q3C1V0 323 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 CASP12Q6UXS9 341 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 AAED1Q7RTV5 226 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 EPHX4Q8IUS5 362 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 ZNF610Q8N9Z0 462 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 RNASE6Q93091 150 aaKnown RBP15.18■□□□□ 0.02
HDAC6-235ENST00000495515 FAM46AQ96IP4 442 aaKnown RBP15.18■□□□□ 0.02
HDAC6-235ENST00000495515 DOCK7Q96N67 2140 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 RBM24Q9BX46 236 aaKnown RBP15.18■□□□□ 0.02
HDAC6-235ENST00000495515 OPN3Q9H1Y3 402 aaPredicted RBP15.18■□□□□ 0.02
HDAC6-235ENST00000495515 ELOVL5Q9NYP7 299 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 B3GAT1Q9P2W7 334 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 DNAJB9Q9UBS3 223 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 RCE1Q9Y256 329 aa15.18■□□□□ 0.02
HDAC6-235ENST00000495515 LRRK2Q5S007 2527 aa15.17■□□□□ 0.02
HDAC6-235ENST00000495515 PRSS44E7EML9 344 aa15.17■□□□□ 0.02
HDAC6-235ENST00000495515 C11orf98E9PRG8 122 aa15.17■□□□□ 0.02
HDAC6-235ENST00000495515 E2F6O75461 281 aa15.17■□□□□ 0.02
HDAC6-235ENST00000495515 CNOT4O95628 575 aaKnown RBP15.17■□□□□ 0.02
HDAC6-235ENST00000495515 MAKP20794 623 aa15.17■□□□□ 0.02
HDAC6-235ENST00000495515 DNAJA1P31689 397 aaKnown RBP15.17■□□□□ 0.02
HDAC6-235ENST00000495515 PEX19P40855 299 aa15.17■□□□□ 0.02
HDAC6-235ENST00000495515 OMPP47874 163 aa15.17■□□□□ 0.02
HDAC6-235ENST00000495515 CLDN17P56750 224 aa15.17■□□□□ 0.02
HDAC6-235ENST00000495515 PRPS1P60891 318 aa15.17■□□□□ 0.02
HDAC6-235ENST00000495515 POU3F1Q03052 451 aaPredicted RBP15.17■□□□□ 0.02
HDAC6-235ENST00000495515 KPNB1Q14974 876 aaKnown RBP15.17■□□□□ 0.02
HDAC6-235ENST00000495515 ZFP1Q6P2D0 407 aa15.17■□□□□ 0.02
HDAC6-235ENST00000495515 TFAP2EQ6VUC0 442 aa15.17■□□□□ 0.02
HDAC6-235ENST00000495515 KIF18BQ86Y91 864 aa15.17■□□□□ 0.02
HDAC6-235ENST00000495515 ZIC4Q8N9L1 334 aa15.17■□□□□ 0.02
HDAC6-235ENST00000495515 OR4C15Q8NGM1 316 aa15.17■□□□□ 0.02
HDAC6-235ENST00000495515 SLCO4A1Q96BD0 722 aa15.17■□□□□ 0.02
HDAC6-235ENST00000495515 ZNF385AQ96PM9 386 aaKnown RBP15.17■□□□□ 0.02
HDAC6-235ENST00000495515 TAS2R5Q9NYW4 299 aa15.17■□□□□ 0.02
HDAC6-235ENST00000495515 HIF3AQ9Y2N7 669 aa15.17■□□□□ 0.02
HDAC6-235ENST00000495515 U3KQV3 271 aa15.17■□□□□ 0.02
HDAC6-235ENST00000495515 PCNX1Q96RV3 2341 aa15.17■□□□□ 0.02
HDAC6-235ENST00000495515 A0A1W2PRG6 482 aa15.16■□□□□ 0.02
HDAC6-235ENST00000495515 ZNF726A6NNF4 738 aa15.16■□□□□ 0.02
HDAC6-235ENST00000495515 CLOCKO15516 846 aa15.16■□□□□ 0.02
HDAC6-235ENST00000495515 TIPRLO75663 272 aa15.16■□□□□ 0.02
HDAC6-235ENST00000495515 HPRP00739 348 aa15.16■□□□□ 0.02
HDAC6-235ENST00000495515 FASP25445 335 aa15.16■□□□□ 0.02
HDAC6-235ENST00000495515 UQCRC1P31930 480 aa15.16■□□□□ 0.02
HDAC6-235ENST00000495515 AQP2P41181 271 aa15.16■□□□□ 0.02
HDAC6-235ENST00000495515 PCYT1AP49585 367 aa15.16■□□□□ 0.02
HDAC6-235ENST00000495515 RPL18Q07020 188 aaKnown RBP15.16■□□□□ 0.02
HDAC6-235ENST00000495515 MICAQ29983 383 aa15.16■□□□□ 0.02
HDAC6-235ENST00000495515 ZBED5Q49AG3 693 aa15.16■□□□□ 0.02
HDAC6-235ENST00000495515 ALG10Q5BKT4 473 aa15.16■□□□□ 0.02
HDAC6-235ENST00000495515 HDDC2Q7Z4H3 204 aa15.16■□□□□ 0.02
HDAC6-235ENST00000495515 ZER1Q7Z7L7 766 aa15.16■□□□□ 0.02
HDAC6-235ENST00000495515 UBE2J2Q8N2K1 259 aa15.16■□□□□ 0.02
HDAC6-235ENST00000495515 POMGNT2Q8NAT1 580 aa15.16■□□□□ 0.02
HDAC6-235ENST00000495515 OR51A7Q8NH64 312 aa15.16■□□□□ 0.02
HDAC6-235ENST00000495515 GNPDA2Q8TDQ7 276 aa15.16■□□□□ 0.02
HDAC6-235ENST00000495515 BDH2Q9BUT1 245 aa15.16■□□□□ 0.02
HDAC6-235ENST00000495515 INIPQ9NRY2 104 aa15.16■□□□□ 0.02
HDAC6-235ENST00000495515 A1L4Q6 167 aa15.15■□□□□ 0.02
HDAC6-235ENST00000495515 UNC119BA6NIH7 251 aa15.15■□□□□ 0.02
HDAC6-235ENST00000495515 TRAF3IP2O43734 574 aaPredicted RBP15.15■□□□□ 0.02
HDAC6-235ENST00000495515 SLC43A1O75387 559 aa15.15■□□□□ 0.02
HDAC6-235ENST00000495515 SERPINI2O75830 405 aa15.15■□□□□ 0.02
HDAC6-235ENST00000495515 KRT33AO76009 404 aa15.15■□□□□ 0.02
HDAC6-235ENST00000495515 TSPAN19P0C672 248 aa15.15■□□□□ 0.02
HDAC6-235ENST00000495515 POU2F1P14859 743 aa15.15■□□□□ 0.02
HDAC6-235ENST00000495515 FPR3P25089 353 aa15.15■□□□□ 0.02
HDAC6-235ENST00000495515 CD79BP40259 229 aa15.15■□□□□ 0.02
HDAC6-235ENST00000495515 RPS4XP62701 263 aaKnown RBP15.15■□□□□ 0.02
HDAC6-235ENST00000495515 TFF3Q07654 80 aa15.15■□□□□ 0.02
HDAC6-235ENST00000495515 P2RY6Q15077 328 aa15.15■□□□□ 0.02
HDAC6-235ENST00000495515 FBXW9Q5XUX1 488 aa15.15■□□□□ 0.02
HDAC6-235ENST00000495515 C1orf94Q6P1W5 598 aa15.15■□□□□ 0.02
HDAC6-235ENST00000495515 NIPAL3Q6P499 406 aa15.15■□□□□ 0.02
HDAC6-235ENST00000495515 ZNF474Q6S9Z5 364 aaPredicted RBP15.15■□□□□ 0.02
HDAC6-235ENST00000495515 SLC35D2Q76EJ3 337 aa15.15■□□□□ 0.02
HDAC6-235ENST00000495515 ABHD12BQ7Z5M8 362 aaPredicted RBP15.15■□□□□ 0.02
HDAC6-235ENST00000495515 MEX3DQ86XN8 651 aaKnown RBP15.15■□□□□ 0.02
HDAC6-235ENST00000495515 MED12LQ86YW9 2145 aa15.15■□□□□ 0.02
HDAC6-235ENST00000495515 OR13C2Q8NGS9 318 aa15.15■□□□□ 0.02
HDAC6-235ENST00000495515 GIPC3Q8TF64 312 aa15.15■□□□□ 0.02
HDAC6-235ENST00000495515 ADAD1Q96M93 576 aaKnown RBP15.15■□□□□ 0.02
HDAC6-235ENST00000495515 PSMG3-AS1Q96PY0 264 aa15.15■□□□□ 0.02
HDAC6-235ENST00000495515 TNFRSF13CQ96RJ3 184 aa15.15■□□□□ 0.02
HDAC6-235ENST00000495515 DENND2DQ9H6A0 471 aaPredicted RBP15.15■□□□□ 0.02
HDAC6-235ENST00000495515 GALNT8Q9NY28 637 aa15.15■□□□□ 0.02
HDAC6-235ENST00000495515 STX18Q9P2W9 335 aaKnown RBP15.15■□□□□ 0.02
HDAC6-235ENST00000495515 UPB1Q9UBR1 384 aa15.15■□□□□ 0.02
HDAC6-235ENST00000495515 MPDZO75970 2070 aa15.14■□□□□ 0.01
HDAC6-235ENST00000495515 TRAV27A0A087WT01 109 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms