RNA–Protein interactions for RNA: ENST00000494618.1

NCL-210, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 910 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-210ENST00000494618 GBA3Q9H227 469 aa2.79□□□□□ -1.96
NCL-210ENST00000494618 COQ10BQ9H8M1 238 aa2.79□□□□□ -1.96
NCL-210ENST00000494618 NHEJ1Q9H9Q4 299 aaPredicted RBP2.79□□□□□ -1.96
NCL-210ENST00000494618 A8MXQ7 604 aa2.78□□□□□ -1.96
NCL-210ENST00000494618 ENTPD5O75356 428 aa2.78□□□□□ -1.96
NCL-210ENST00000494618 OXSR1O95747 527 aaPredicted RBP2.78□□□□□ -1.96
NCL-210ENST00000494618 ALDOBP05062 364 aa2.78□□□□□ -1.96
NCL-210ENST00000494618 ZDHHC11BP0C7U3 371 aa2.78□□□□□ -1.96
NCL-210ENST00000494618 HSMCR30P0CW71 290 aa2.78□□□□□ -1.96
NCL-210ENST00000494618 EPB41P11171 864 aaKnown RBP2.78□□□□□ -1.96
NCL-210ENST00000494618 NCF1P14598 390 aaPredicted RBP2.78□□□□□ -1.96
NCL-210ENST00000494618 CA8P35219 290 aa2.78□□□□□ -1.96
NCL-210ENST00000494618 VGLL4Q14135 290 aa2.78□□□□□ -1.96
NCL-210ENST00000494618 GANABQ14697 944 aaKnown RBP2.78□□□□□ -1.96
NCL-210ENST00000494618 SGCAQ16586 387 aa2.78□□□□□ -1.96
NCL-210ENST00000494618 KPRPQ5T749 579 aaPredicted RBP2.78□□□□□ -1.96
NCL-210ENST00000494618 LCN12Q6JVE5 192 aa2.78□□□□□ -1.96
NCL-210ENST00000494618 FAM86B1Q8N7N1 296 aa2.78□□□□□ -1.96
NCL-210ENST00000494618 ACTRT1Q8TDG2 376 aa2.78□□□□□ -1.96
NCL-210ENST00000494618 DNAJC19Q96DA6 116 aa2.78□□□□□ -1.96
NCL-210ENST00000494618 ING2Q9H160 280 aa2.78□□□□□ -1.96
NCL-210ENST00000494618 ZNF430Q9H8G1 570 aaPredicted RBP2.78□□□□□ -1.96
NCL-210ENST00000494618 CABIN1Q9Y6J0 2220 aa2.78□□□□□ -1.96
NCL-210ENST00000494618 NUP214P35658 2090 aaPredicted RBP2.78□□□□□ -1.96
NCL-210ENST00000494618 POLR2DO15514 142 aaKnown RBP2.77□□□□□ -1.97
NCL-210ENST00000494618 B4GALT2O60909 372 aa2.77□□□□□ -1.97
NCL-210ENST00000494618 CNR1P21554 472 aa2.77□□□□□ -1.97
NCL-210ENST00000494618 OMGP23515 440 aa2.77□□□□□ -1.97
NCL-210ENST00000494618 SPIBQ01892 262 aa2.77□□□□□ -1.97
NCL-210ENST00000494618 REG3AQ06141 175 aa2.77□□□□□ -1.97
NCL-210ENST00000494618 PDIA2Q13087 525 aaKnown RBP2.77□□□□□ -1.97
NCL-210ENST00000494618 DPYSL2Q16555 572 aa2.77□□□□□ -1.97
NCL-210ENST00000494618 GUCA2BQ16661 112 aa2.77□□□□□ -1.97
NCL-210ENST00000494618 CARD16Q5EG05 197 aa2.77□□□□□ -1.97
NCL-210ENST00000494618 LYPD2Q6UXB3 125 aa2.77□□□□□ -1.97
NCL-210ENST00000494618 HMGN2P46Q86SG4 172 aa2.77□□□□□ -1.97
NCL-210ENST00000494618 ZSCAN30Q86W11 494 aa2.77□□□□□ -1.97
NCL-210ENST00000494618 PLA2G4DQ86XP0 818 aa2.77□□□□□ -1.97
NCL-210ENST00000494618 PHF10Q8WUB8 498 aaKnown RBP2.77□□□□□ -1.97
NCL-210ENST00000494618 UFD1Q92890 307 aa2.77□□□□□ -1.97
NCL-210ENST00000494618 TGM7Q96PF1 710 aa2.77□□□□□ -1.97
NCL-210ENST00000494618 CLCC1Q96S66 551 aa2.77□□□□□ -1.97
NCL-210ENST00000494618 ZNF2Q9BSG1 426 aaPredicted RBP2.77□□□□□ -1.97
NCL-210ENST00000494618 CAPS2Q9BXY5 557 aa2.77□□□□□ -1.97
NCL-210ENST00000494618 CTPS2Q9NRF8 586 aa2.77□□□□□ -1.97
NCL-210ENST00000494618 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.77□□□□□ -1.973e-29■□□□□ 9.3
NCL-210ENST00000494618 MRPS33Q9Y291 106 aaKnown RBP2.77□□□□□ -1.97
NCL-210ENST00000494618 NFASCO94856 1347 aa2.76□□□□□ -1.97
NCL-210ENST00000494618 KIF16BQ96L93 1317 aa2.76□□□□□ -1.97
NCL-210ENST00000494618 TCRBV9S1A1TA0A576 114 aa2.76□□□□□ -1.97
NCL-210ENST00000494618 PLAC8L1A1L4L8 177 aa2.76□□□□□ -1.97
NCL-210ENST00000494618 ATP5LO75964 103 aa2.76□□□□□ -1.97
NCL-210ENST00000494618 CSF3P09919 207 aa2.76□□□□□ -1.97
NCL-210ENST00000494618 GKN3PP0CG01 181 aa2.76□□□□□ -1.97
NCL-210ENST00000494618 MUC1P15941 1255 aaPredicted RBP2.76□□□□□ -1.97
NCL-210ENST00000494618 PGAM1P18669 254 aa2.76□□□□□ -1.97
NCL-210ENST00000494618 ATP6V1C1P21283 382 aa2.76□□□□□ -1.97
NCL-210ENST00000494618 HMGB2P26583 209 aaKnown RBP2.76□□□□□ -1.97
NCL-210ENST00000494618 RPL13AP40429 203 aaKnown RBP2.76□□□□□ -1.97
NCL-210ENST00000494618 GSSP48637 474 aa2.76□□□□□ -1.97
NCL-210ENST00000494618 PPT1P50897 306 aa2.76□□□□□ -1.97
NCL-210ENST00000494618 ERVK-25P63136 954 aa2.76□□□□□ -1.97
NCL-210ENST00000494618 C1orf61Q13536 156 aa2.76□□□□□ -1.97
NCL-210ENST00000494618 C10orf120Q5SQS8 335 aa2.76□□□□□ -1.97
NCL-210ENST00000494618 C1orf220Q5T0J3 134 aa2.76□□□□□ -1.97
NCL-210ENST00000494618 ZNF836Q6ZNA1 936 aa2.76□□□□□ -1.97
NCL-210ENST00000494618 THOC6Q86W42 341 aaKnown RBP2.76□□□□□ -1.97
NCL-210ENST00000494618 PGAM4Q8N0Y7 254 aa2.76□□□□□ -1.97
NCL-210ENST00000494618 ACOT4Q8N9L9 421 aa2.76□□□□□ -1.97
NCL-210ENST00000494618 UBE2Q2Q8WVN8 375 aa2.76□□□□□ -1.97
NCL-210ENST00000494618 AURKBQ96GD4 344 aaPredicted RBP2.76□□□□□ -1.97
NCL-210ENST00000494618 TPPP3Q9BW30 176 aa2.76□□□□□ -1.97
NCL-210ENST00000494618 GIN1Q9NXP7 522 aa2.76□□□□□ -1.97
NCL-210ENST00000494618 RNF14Q9UBS8 474 aa2.76□□□□□ -1.97
NCL-210ENST00000494618 UBTFL1P0CB47 393 aaPredicted RBP2.75□□□□□ -1.97
NCL-210ENST00000494618 NPY1RP25929 384 aa2.75□□□□□ -1.97
NCL-210ENST00000494618 RGS4P49798 205 aa2.75□□□□□ -1.97
NCL-210ENST00000494618 SLC36A3Q495N2 470 aa2.75□□□□□ -1.97
NCL-210ENST00000494618 ZBED5Q49AG3 693 aa2.75□□□□□ -1.97
NCL-210ENST00000494618 RIPPLY2Q5TAB7 128 aa2.75□□□□□ -1.97
NCL-210ENST00000494618 TMEM225Q6GV28 225 aa2.75□□□□□ -1.97
NCL-210ENST00000494618 C1orf94Q6P1W5 598 aa2.75□□□□□ -1.97
NCL-210ENST00000494618 CES3Q6UWW8 571 aa2.75□□□□□ -1.97
NCL-210ENST00000494618 Q6ZR03 302 aa2.75□□□□□ -1.97
NCL-210ENST00000494618 UTS2BQ765I0 119 aa2.75□□□□□ -1.97
NCL-210ENST00000494618 IPMKQ8NFU5 416 aa2.75□□□□□ -1.97
NCL-210ENST00000494618 VN1R2Q8NFZ6 395 aa2.75□□□□□ -1.97
NCL-210ENST00000494618 FGF14Q92915 247 aa2.75□□□□□ -1.97
NCL-210ENST00000494618 UBE2E3Q969T4 207 aa2.75□□□□□ -1.97
NCL-210ENST00000494618 ZNF641Q96N77 438 aaPredicted RBP2.75□□□□□ -1.97
NCL-210ENST00000494618 NOX3Q9HBY0 568 aa2.75□□□□□ -1.97
NCL-210ENST00000494618 SLC40A1Q9NP59 571 aa2.75□□□□□ -1.97
NCL-210ENST00000494618 SLCO1B3Q9NPD5 702 aa2.75□□□□□ -1.97
NCL-210ENST00000494618 HPF1Q9NWY4 346 aa2.75□□□□□ -1.97
NCL-210ENST00000494618 CALYQ9NYX4 217 aa2.75□□□□□ -1.97
NCL-210ENST00000494618 LAMP5Q9UJQ1 280 aa2.75□□□□□ -1.97
NCL-210ENST00000494618 BRWD3Q6RI45 1802 aa2.75□□□□□ -1.97
NCL-210ENST00000494618 PNPLA6Q8IY17 1366 aa2.74□□□□□ -1.97
NCL-210ENST00000494618 PLA2R1Q13018 1463 aa2.74□□□□□ -1.97
NCL-210ENST00000494618 TRAV40A0A0B4J280 105 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms