RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 RNF13O43567 381 aa15.86■□□□□ 0.13
PDLIM7-208ENST00000493815 VAMP5O95183 116 aa15.86■□□□□ 0.13
PDLIM7-208ENST00000493815 F13BP05160 661 aa15.86■□□□□ 0.13
PDLIM7-208ENST00000493815 GRNP28799 593 aaKnown RBP15.86■□□□□ 0.13
PDLIM7-208ENST00000493815 FHL1Q13642 323 aa15.86■□□□□ 0.13
PDLIM7-208ENST00000493815 C1DQ13901 141 aaKnown RBP15.86■□□□□ 0.13
PDLIM7-208ENST00000493815 TMPRSS11FQ6ZWK6 438 aa15.86■□□□□ 0.13
PDLIM7-208ENST00000493815 OAFQ86UD1 273 aa15.86■□□□□ 0.13
PDLIM7-208ENST00000493815 WDFY1Q8IWB7 410 aa15.86■□□□□ 0.13
PDLIM7-208ENST00000493815 HS3ST5Q8IZT8 346 aa15.86■□□□□ 0.13
PDLIM7-208ENST00000493815 ADPRHL1Q8NDY3 354 aa15.86■□□□□ 0.13
PDLIM7-208ENST00000493815 LIPHQ8WWY8 451 aa15.86■□□□□ 0.13
PDLIM7-208ENST00000493815 DUS3LQ96G46 650 aaKnown RBP15.86■□□□□ 0.13
PDLIM7-208ENST00000493815 TNFRSF13CQ96RJ3 184 aa15.86■□□□□ 0.13
PDLIM7-208ENST00000493815 KCNJ16Q9NPI9 418 aa15.86■□□□□ 0.13
PDLIM7-208ENST00000493815 ARMC1Q9NVT9 282 aa15.86■□□□□ 0.13
PDLIM7-208ENST00000493815 MED29Q9NX70 200 aa15.86■□□□□ 0.13
PDLIM7-208ENST00000493815 GPR171O14626 319 aa15.85■□□□□ 0.13
PDLIM7-208ENST00000493815 CLOCKO15516 846 aa15.85■□□□□ 0.13
PDLIM7-208ENST00000493815 CCNB2O95067 398 aa15.85■□□□□ 0.13
PDLIM7-208ENST00000493815 CLDN1O95832 211 aa15.85■□□□□ 0.13
PDLIM7-208ENST00000493815 POU2F1P14859 743 aa15.85■□□□□ 0.13
PDLIM7-208ENST00000493815 HOXB6P17509 224 aaKnown RBP15.85■□□□□ 0.13
PDLIM7-208ENST00000493815 CLDN17P56750 224 aa15.85■□□□□ 0.13
PDLIM7-208ENST00000493815 SLC25A35Q3KQZ1 300 aa15.85■□□□□ 0.13
PDLIM7-208ENST00000493815 PGBD2Q6P3X8 592 aa15.85■□□□□ 0.13
PDLIM7-208ENST00000493815 ZNF474Q6S9Z5 364 aaPredicted RBP15.85■□□□□ 0.13
PDLIM7-208ENST00000493815 CASP12Q6UXS9 341 aa15.85■□□□□ 0.13
PDLIM7-208ENST00000493815 AMIGO2Q86SJ2 522 aa15.85■□□□□ 0.13
PDLIM7-208ENST00000493815 IGFN1Q86VF2 1251 aa15.85■□□□□ 0.13
PDLIM7-208ENST00000493815 UEVLDQ8IX04 471 aa15.85■□□□□ 0.13
PDLIM7-208ENST00000493815 LRTOMTQ8WZ04 291 aa15.85■□□□□ 0.13
PDLIM7-208ENST00000493815 TXNDC15Q96J42 360 aa15.85■□□□□ 0.13
PDLIM7-208ENST00000493815 NTN4Q9HB63 628 aa15.85■□□□□ 0.13
PDLIM7-208ENST00000493815 PLSCR4Q9NRQ2 329 aa15.85■□□□□ 0.13
PDLIM7-208ENST00000493815 DNAJB9Q9UBS3 223 aa15.85■□□□□ 0.13
PDLIM7-208ENST00000493815 PRSS50Q9UI38 385 aa15.85■□□□□ 0.13
PDLIM7-208ENST00000493815 TMEM5Q9Y2B1 443 aa15.85■□□□□ 0.13
PDLIM7-208ENST00000493815 TRAF3IP2O43734 574 aaPredicted RBP15.84■□□□□ 0.13
PDLIM7-208ENST00000493815 MRPL33O75394 65 aaKnown RBP15.84■□□□□ 0.13
PDLIM7-208ENST00000493815 E2F6O75461 281 aa15.84■□□□□ 0.13
PDLIM7-208ENST00000493815 ZNF26P17031 533 aaPredicted RBP15.84■□□□□ 0.13
PDLIM7-208ENST00000493815 UQCRC1P31930 480 aa15.84■□□□□ 0.13
PDLIM7-208ENST00000493815 LGALS3BPQ08380 585 aa15.84■□□□□ 0.13
PDLIM7-208ENST00000493815 POU4F3Q15319 338 aa15.84■□□□□ 0.13
PDLIM7-208ENST00000493815 MICAQ29983 383 aa15.84■□□□□ 0.13
PDLIM7-208ENST00000493815 ZNF770Q6IQ21 691 aaPredicted RBP15.84■□□□□ 0.13
PDLIM7-208ENST00000493815 TFAP2EQ6VUC0 442 aa15.84■□□□□ 0.13
PDLIM7-208ENST00000493815 NHLRC1Q6VVB1 395 aa15.84■□□□□ 0.13
PDLIM7-208ENST00000493815 AAED1Q7RTV5 226 aa15.84■□□□□ 0.13
PDLIM7-208ENST00000493815 ZNF100Q8IYN0 542 aa15.84■□□□□ 0.13
PDLIM7-208ENST00000493815 EMC6Q9BV81 110 aa15.84■□□□□ 0.13
PDLIM7-208ENST00000493815 PIGMQ9H3S5 423 aa15.84■□□□□ 0.13
PDLIM7-208ENST00000493815 JKAMPQ9P055 326 aa15.84■□□□□ 0.13
PDLIM7-208ENST00000493815 IL20RAQ9UHF4 553 aa15.84■□□□□ 0.13
PDLIM7-208ENST00000493815 MAGED1Q9Y5V3 778 aaPredicted RBP15.84■□□□□ 0.13
PDLIM7-208ENST00000493815 A8MXE2 369 aa15.83■□□□□ 0.13
PDLIM7-208ENST00000493815 H3BNX3 289 aa15.83■□□□□ 0.13
PDLIM7-208ENST00000493815 C19orf84I3L1E1 186 aa15.83■□□□□ 0.13
PDLIM7-208ENST00000493815 KLF4O43474 513 aa15.83■□□□□ 0.13
PDLIM7-208ENST00000493815 GASTP01350 101 aa15.83■□□□□ 0.13
PDLIM7-208ENST00000493815 CD8BP10966 210 aa15.83■□□□□ 0.13
PDLIM7-208ENST00000493815 IFNGR1P15260 489 aa15.83■□□□□ 0.13
PDLIM7-208ENST00000493815 SELENOPP49908 381 aa15.83■□□□□ 0.13
PDLIM7-208ENST00000493815 RPS4XP62701 263 aaKnown RBP15.83■□□□□ 0.13
PDLIM7-208ENST00000493815 TFF3Q07654 80 aa15.83■□□□□ 0.13
PDLIM7-208ENST00000493815 SNTB1Q13884 538 aaKnown RBP15.83■□□□□ 0.13
PDLIM7-208ENST00000493815 NIPAL3Q6P499 406 aa15.83■□□□□ 0.13
PDLIM7-208ENST00000493815 PXKQ7Z7A4 578 aa15.83■□□□□ 0.13
PDLIM7-208ENST00000493815 AQP11Q8NBQ7 271 aa15.83■□□□□ 0.13
PDLIM7-208ENST00000493815 TACO1Q9BSH4 297 aaKnown RBP15.83■□□□□ 0.13
PDLIM7-208ENST00000493815 SEMA6AQ9H2E6 1030 aa15.83■□□□□ 0.13
PDLIM7-208ENST00000493815 MCCC2Q9HCC0 563 aa15.83■□□□□ 0.13
PDLIM7-208ENST00000493815 KRCC1Q9NPI7 259 aaPredicted RBP15.83■□□□□ 0.13
PDLIM7-208ENST00000493815 NOX1Q9Y5S8 564 aa15.83■□□□□ 0.13
PDLIM7-208ENST00000493815 LOC102725191A0A1B0GVB3 256 aa15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 HTR3EA5X5Y0 456 aa15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 UNC119BA6NIH7 251 aa15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 MSTNO14793 375 aa15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 HNRNPRO43390 633 aaKnown RBP15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 DEAF1O75398 565 aaPredicted RBP15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 PRKACGP22612 351 aa15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 DNAJA1P31689 397 aaKnown RBP15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 OR3A2P47893 321 aa15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 ASCL1P50553 236 aa15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 ZP4Q12836 540 aa15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 MELKQ14680 651 aa15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 ATP6AP1Q15904 470 aa15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 ZBED5Q49AG3 693 aa15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 CARD17Q5XLA6 110 aa15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 HMBOX1Q6NT76 420 aa15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 C1orf94Q6P1W5 598 aa15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 UBE2J2Q8N2K1 259 aa15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 OR10G2Q8NGC3 310 aa15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 GTPBP3Q969Y2 492 aaKnown RBP15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 APH1AQ96BI3 265 aa15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 RBM24Q9BX46 236 aaKnown RBP15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 ENKD1Q9H0I2 346 aa15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 GALNT8Q9NY28 637 aa15.83■□□□□ 0.12
PDLIM7-208ENST00000493815 PDP1Q9P0J1 537 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms