RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 MRPL41Q8IXM3 137 aaKnown RBP6.32□□□□□ -1.4
VPS13B-205ENST00000493587 OR8U1Q8NH10 309 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 THEM6Q8WUY1 208 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 POLR2J3Q9H1A7 115 aaKnown RBP6.32□□□□□ -1.4
VPS13B-205ENST00000493587 RDH14Q9HBH5 336 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 UBQLN4Q9NRR5 601 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 PNO1Q9NRX1 252 aaKnown RBP6.32□□□□□ -1.4
VPS13B-205ENST00000493587 GPATCH2Q9NW75 528 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 PRODH2Q9UF12 536 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 ZNF346Q9UL40 294 aaKnown RBP6.32□□□□□ -1.4
VPS13B-205ENST00000493587 TBC1D3KA0A087X1G2 549 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 A0A0U1RQV5 110 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 NPEPPSL1A6NEC2 478 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 OR51F1A6NGY5 319 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 FAM183AA6NL82 134 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 SNRPGP15A8MWD9 76 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 HHLA1C9JL84 531 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 J3KTA2 159 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 GABRDO14764 452 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 BCAT2O15382 392 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-205ENST00000493587 ZNF432O94892 652 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 OR2F2O95006 317 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 CYBAP13498 195 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 KCNE1P15382 129 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 CD1DP15813 335 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 FGF9P31371 208 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-205ENST00000493587 CHRNA4P43681 627 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 YBEYP58557 167 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-205ENST00000493587 TPI1P60174 286 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 TSPAN31Q12999 210 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 OR2F1Q13607 317 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 DCST1Q5T197 706 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 MRNIPQ6NTE8 343 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 ZNF774Q6NX45 483 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 FAM199XQ6PEV8 388 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-205ENST00000493587 BTNL3Q6UXE8 466 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 CD163Q86VB7 1156 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 HIST3H2BBQ8N257 126 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 METTL27Q8N6F8 245 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-205ENST00000493587 OR1J1Q8NGS3 322 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 C1orf216Q8TAB5 229 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 THAP4Q8WY91 577 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 HLA-CQ95604 372 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 MAL2Q969L2 176 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 ALKBH3Q96Q83 286 aaPredicted RBP6.32□□□□□ -1.4
VPS13B-205ENST00000493587 TP53RKQ96S44 253 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 HIPK2Q9H2X6 1198 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 FKRPQ9H9S5 495 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 ICKQ9UPZ9 632 aa6.32□□□□□ -1.4
VPS13B-205ENST00000493587 NOP16Q9Y3C1 178 aaKnown RBP6.32□□□□□ -1.4
VPS13B-205ENST00000493587 TRBV11-1A0A0K0K1C0 115 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 NAP1L6A6NFF2 107 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 OR5H14A6NHG9 310 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 C17orf105B2RV13 164 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 PYCARD-AS1I3L0S3 204 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 K7EPK0 472 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 FLRT2O43155 660 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 CYB5BO43169 146 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 ECI2O75521 394 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 SERPINA5P05154 406 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 GIMD1P0DJR0 217 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 IRF2P14316 349 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 SELEP16581 610 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 IGFBP6P24592 240 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-205ENST00000493587 NTSP30990 170 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 THBS2P35442 1172 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 FAUP35544 74 aaKnown RBP6.31□□□□□ -1.4
VPS13B-205ENST00000493587 BTN3A2P78410 334 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 TPBGQ13641 420 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 UBE2V2Q15819 145 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 GOLGA7BQ2TAP0 167 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 RAB41Q5JT25 222 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 EXOSC6Q5RKV6 272 aaKnown RBP6.31□□□□□ -1.4
VPS13B-205ENST00000493587 C10orf120Q5SQS8 335 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 WDR73Q6P4I2 378 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 TMEM220Q6QAJ8 160 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 DHRS11Q6UWP2 260 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 SLC16A14Q7RTX9 510 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 KCNRGQ8N5I3 272 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 FAM71E2Q8N5Q1 922 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 OR14C36Q8NHC7 312 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 BRIX1Q8TDN6 353 aaKnown RBP6.31□□□□□ -1.4
VPS13B-205ENST00000493587 LCN9Q8WX39 176 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 PPCDCQ96CD2 204 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 FUBP3Q96I24 572 aaKnown RBP eCLIP6.31□□□□□ -1.4
VPS13B-205ENST00000493587 SNX22Q96L94 193 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 RAB33BQ9H082 229 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 NMNAT1Q9HAN9 279 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-205ENST00000493587 MIEF1Q9NQG6 463 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 MYOTQ9UBF9 498 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 IL19Q9UHD0 177 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 TSPAN16Q9UKR8 245 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 Q9Y3F1 56 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 FBXO7Q9Y3I1 522 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 A0A1B0GV50 99 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 ANKRD20A5PA0PJZ0 165 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 GXYLT2A0PJZ3 443 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 MANSC4A6NHS7 340 aaPredicted RBP6.31□□□□□ -1.4
VPS13B-205ENST00000493587 GOSR1O95249 250 aa6.31□□□□□ -1.4
VPS13B-205ENST00000493587 AIFM1O95831 613 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms