RNA–Protein interactions for RNA: ENST00000491867.5

ATG4B-222, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 435 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-222ENST00000491867 BCL6BQ8N143 479 aaPredicted RBP11.83□□□□□ -0.52
ATG4B-222ENST00000491867 ARFGAP2Q8N6H7 521 aa11.83□□□□□ -0.52
ATG4B-222ENST00000491867 IL17RDQ8NFM7 739 aa11.83□□□□□ -0.52
ATG4B-222ENST00000491867 XAGE5Q8WWM1 108 aa11.83□□□□□ -0.52
ATG4B-222ENST00000491867 DDIT4LQ96D03 193 aa11.83□□□□□ -0.52
ATG4B-222ENST00000491867 ZG16BQ96DA0 208 aa11.83□□□□□ -0.52
ATG4B-222ENST00000491867 PPP1R36Q96LQ0 422 aa11.83□□□□□ -0.52
ATG4B-222ENST00000491867 SF3B5Q9BWJ5 86 aaKnown RBP11.83□□□□□ -0.52
ATG4B-222ENST00000491867 AKTIPQ9H8T0 292 aa11.83□□□□□ -0.52
ATG4B-222ENST00000491867 MYEF2Q9P2K5 600 aaKnown RBP11.83□□□□□ -0.52
ATG4B-222ENST00000491867 FZR1Q9UM11 496 aa11.83□□□□□ -0.52
ATG4B-222ENST00000491867 TMED7Q9Y3B3 224 aa11.83□□□□□ -0.52
ATG4B-222ENST00000491867 TMEM72A0PK05 275 aa11.82□□□□□ -0.52
ATG4B-222ENST00000491867 ZC3H12DA2A288 527 aaKnown RBP11.82□□□□□ -0.52
ATG4B-222ENST00000491867 CLDN24A6NM45 220 aa11.82□□□□□ -0.52
ATG4B-222ENST00000491867 TMEM229AB2RXF0 380 aa11.82□□□□□ -0.52
ATG4B-222ENST00000491867 M0QZ24 198 aa11.82□□□□□ -0.52
ATG4B-222ENST00000491867 TYROBPO43914 113 aa11.82□□□□□ -0.52
ATG4B-222ENST00000491867 IGHV2-5P01817 119 aa11.82□□□□□ -0.52
ATG4B-222ENST00000491867 NAT2P11245 290 aa11.82□□□□□ -0.52
ATG4B-222ENST00000491867 ARR3P36575 388 aa11.82□□□□□ -0.52
ATG4B-222ENST00000491867 HTR3AP46098 478 aa11.82□□□□□ -0.52
ATG4B-222ENST00000491867 IDH2P48735 452 aaKnown RBP11.82□□□□□ -0.52
ATG4B-222ENST00000491867 SH3BGRP55822 239 aaPredicted RBP11.82□□□□□ -0.52
ATG4B-222ENST00000491867 KCNJ10P78508 379 aa11.82□□□□□ -0.52
ATG4B-222ENST00000491867 HPCAP84074 193 aa11.82□□□□□ -0.52
ATG4B-222ENST00000491867 ARF1P84077 181 aaKnown RBP11.82□□□□□ -0.52
ATG4B-222ENST00000491867 ROR2Q01974 943 aaKnown RBP11.82□□□□□ -0.52
ATG4B-222ENST00000491867 IFFO1Q0D2I5 559 aa11.82□□□□□ -0.52
ATG4B-222ENST00000491867 ANXA8L1Q5VT79 327 aa11.82□□□□□ -0.52
ATG4B-222ENST00000491867 TREML1Q86YW5 311 aa11.82□□□□□ -0.52
ATG4B-222ENST00000491867 WFDC12Q8WWY7 111 aa11.82□□□□□ -0.52
ATG4B-222ENST00000491867 PMM1Q92871 262 aa11.82□□□□□ -0.52
ATG4B-222ENST00000491867 TMIGD2Q96BF3 282 aa11.82□□□□□ -0.52
ATG4B-222ENST00000491867 TESCQ96BS2 214 aa11.82□□□□□ -0.52
ATG4B-222ENST00000491867 NEURL3Q96EH8 262 aa11.82□□□□□ -0.52
ATG4B-222ENST00000491867 ZNF48Q96MX3 618 aaPredicted RBP11.82□□□□□ -0.52
ATG4B-222ENST00000491867 GPA33Q99795 319 aa11.82□□□□□ -0.52
ATG4B-222ENST00000491867 DPY30Q9C005 99 aa11.82□□□□□ -0.52
ATG4B-222ENST00000491867 PIF1Q9H611 641 aa11.82□□□□□ -0.52
ATG4B-222ENST00000491867 PRAMEF27A3QJZ7 478 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 AQP7P3A6NL99 342 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 HMGN4O00479 90 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 AP3D1O14617 1153 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 ZNF208O43345 1280 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 ITM2AO43736 263 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 CPSF4O95639 269 aaKnown RBP11.81□□□□□ -0.52
ATG4B-222ENST00000491867 KNG1P01042 644 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 PCGF2P35227 344 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 CHI3L1P36222 383 aaPredicted RBP11.81□□□□□ -0.52
ATG4B-222ENST00000491867 LCN2P80188 198 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 CEACAM7Q14002 265 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 CASP8Q14790 479 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 SLC9A3R2Q15599 337 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 GPAT3Q53EU6 434 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 NIPAL3Q6P499 406 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 C17orf107Q6ZR85 190 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 ZNF771Q7L3S4 317 aaPredicted RBP11.81□□□□□ -0.52
ATG4B-222ENST00000491867 NUDCD3Q8IVD9 361 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 ZNF781Q8N8C0 355 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 VPS37AQ8NEZ2 397 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 CNOT9Q92600 299 aaKnown RBP11.81□□□□□ -0.52
ATG4B-222ENST00000491867 PKNOX2Q96KN3 472 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 ROPN1BQ9BZX4 212 aaPredicted RBP11.81□□□□□ -0.52
ATG4B-222ENST00000491867 ROPN1Q9HAT0 212 aaPredicted RBP11.81□□□□□ -0.52
ATG4B-222ENST00000491867 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.81□□□□□ -0.52
ATG4B-222ENST00000491867 MARCOQ9UEW3 520 aaPredicted RBP11.81□□□□□ -0.52
ATG4B-222ENST00000491867 OSGIN1Q9UJX0 560 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 NUP50Q9UKX7 468 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 MMP24Q9Y5R2 645 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 NOX1Q9Y5S8 564 aa11.81□□□□□ -0.52
ATG4B-222ENST00000491867 LIPT2A6NK58 231 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 CLDN34H7C241 214 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 C1QCP02747 245 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 GPIP06744 558 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 MYZAPP0CAP1 466 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 RAD52P43351 418 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 MAGEB1P43366 347 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 CAPZA2P47755 286 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 POLR2HP52434 150 aaKnown RBP11.8□□□□□ -0.52
ATG4B-222ENST00000491867 OR7A5Q15622 319 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 DPY19L1Q2PZI1 675 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 ALKBH6Q3KRA9 238 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 ARMCX4Q5H9R4 360 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 SPANXN4Q5MJ08 99 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 TMEM225Q6GV28 225 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 CREB3L2Q70SY1 520 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 SPATC1Q76KD6 591 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 RHOUQ7L0Q8 258 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 WDFY1Q8IWB7 410 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 CMIPQ8IY22 773 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 UBE2FQ969M7 185 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 MS4A3Q96HJ5 214 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 TRNT1Q96Q11 434 aaKnown RBP11.8□□□□□ -0.52
ATG4B-222ENST00000491867 SLC35A5Q9BS91 424 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 ZNF385DQ9H6B1 395 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 PLEK2Q9NYT0 353 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 DUSP13Q9UII6 198 aa11.8□□□□□ -0.52
ATG4B-222ENST00000491867 A0A1W2PPW3 197 aa11.79□□□□□ -0.52
ATG4B-222ENST00000491867 AGAP5A6NIR3 686 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms