RNA–Protein interactions for RNA: ENST00000491791.1

USP4-214, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 3

Gene USP4, Length 821 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-214ENST00000491791 RGS5O15539 181 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 DXOO77932 396 aaKnown RBP9.74□□□□□ -0.85
USP4-214ENST00000491791 APOA1P02647 267 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 UCHL1P09936 223 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 GP1BBP13224 206 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 IL7P13232 177 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 CXCR1P25024 350 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 APEX1P27695 318 aaKnown RBP9.74□□□□□ -0.85
USP4-214ENST00000491791 MSX1P28360 303 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 THBS2P35442 1172 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 AQP2P41181 271 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 CDKN2AP42771 156 aaKnown RBP9.74□□□□□ -0.85
USP4-214ENST00000491791 GBX2P52951 348 aaPredicted RBP9.74□□□□□ -0.85
USP4-214ENST00000491791 BLVRAP53004 296 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 ERVK-25P63136 954 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 CCL7P80098 99 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 E2F1Q01094 437 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 MXD1Q05195 221 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 RPL18Q07020 188 aaKnown RBP9.74□□□□□ -0.85
USP4-214ENST00000491791 SCN1BQ07699 218 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 ZP4Q12836 540 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 SGCBQ16585 318 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 SLC25A53Q5H9E4 307 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 FAM69AQ5T7M9 428 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 EEF1A1P5Q5VTE0 462 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 C1orf189Q5VU69 101 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 FCRLBQ6BAA4 426 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 MRPL14Q6P1L8 145 aaKnown RBP9.74□□□□□ -0.85
USP4-214ENST00000491791 SLC16A9Q7RTY1 509 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 MAMDC2Q7Z304 686 aaPredicted RBP9.74□□□□□ -0.85
USP4-214ENST00000491791 MARCH3Q86UD3 253 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 ADGRG3Q86Y34 549 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 SLC38A9Q8NBW4 561 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 OR5L2Q8NGL0 311 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 OR2T4Q8NH00 348 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 TMEM234Q8WY98 164 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 GHSRQ92847 366 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 HGDQ93099 445 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 TAAR8Q969N4 342 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 OTULINQ96BN8 352 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 KTI12Q96EK9 354 aaPredicted RBP9.74□□□□□ -0.85
USP4-214ENST00000491791 ZC3HAV1LQ96H79 300 aaKnown RBP9.74□□□□□ -0.85
USP4-214ENST00000491791 DIRAS2Q96HU8 199 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 GAL3ST4Q96RP7 486 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 NMNAT3Q96T66 252 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 KCNJ15Q99712 375 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 WDR77Q9BQA1 342 aaPredicted RBP9.74□□□□□ -0.85
USP4-214ENST00000491791 ALG12Q9BV10 488 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 PTDSS2Q9BVG9 487 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 TBL1XR1Q9BZK7 514 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 FANCFQ9NPI8 374 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 RABL2AQ9UBK7 228 aaPredicted RBP9.74□□□□□ -0.85
USP4-214ENST00000491791 RALYQ9UKM9 306 aaKnown RBP9.74□□□□□ -0.85
USP4-214ENST00000491791 RABL2BQ9UNT1 228 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 MSRB2Q9Y3D2 182 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 FER1L5A0AVI2 2057 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 BAHCC1Q9P281 2608 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 PI4KAP42356 2102 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 ASPMQ8IZT6 3477 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 PKD1L2Q7Z442 2459 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 ADAMTS9Q9P2N4 1935 aa9.74□□□□□ -0.85
USP4-214ENST00000491791 PCNX2A6NKB5 2137 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 LOC102723996A0A087X1L8 192 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 TMED7-TICAM2A0A0A6YYA0 188 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 A0A0G2JK05 382 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 A0A1W2PQ72 361 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 ANKUB1A6NFN9 424 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 TMEM200CA6NKL6 621 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 A8MVM7 634 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 FTCDNL1E5RQL4 147 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 J3QLW9 94 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 NTN3O00634 580 aaPredicted RBP9.73□□□□□ -0.85
USP4-214ENST00000491791 LRRTM2O43300 516 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 HCRTR2O43614 444 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 OR2T1O43869 369 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 SCRG1O75711 98 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 ARL6IP5O75915 188 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 DKK1O94907 266 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 HIST1H2ABP04908 130 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 CSF3P09919 207 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 MYF5P13349 255 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 ZNF19P17023 458 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 RANBP1P43487 201 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 DUSP3P51452 185 aaPredicted RBP9.73□□□□□ -0.85
USP4-214ENST00000491791 CTXN1P60606 82 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 RPS11P62280 158 aaKnown RBP eCLIP9.73□□□□□ -0.85
USP4-214ENST00000491791 C17orf67Q0P5P2 114 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 MFSD13AQ14CX5 517 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 BAK1Q16611 211 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 ACSM3Q53FZ2 586 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 PWWP2BQ6NUJ5 590 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 TMEM81Q6P7N7 255 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 CCBE1Q6UXH8 406 aaPredicted RBP9.73□□□□□ -0.85
USP4-214ENST00000491791 LANCL3Q6ZV70 420 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 HIST3H2AQ7L7L0 130 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 SSX6Q7RTT6 188 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 PIP4P1Q86T03 277 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 CDC20BQ86Y33 519 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 TIGD4Q8IY51 512 aa9.73□□□□□ -0.85
USP4-214ENST00000491791 SCAIQ8N9R8 606 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms