RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 LRRC17Q8N6Y2 441 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ZNF433Q8N7K0 673 aaPredicted RBP14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 PIK3C3Q8NEB9 887 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 MCUR1Q96AQ8 359 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 USB1Q9BQ65 265 aaKnown RBP14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 THTPAQ9BU02 230 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ANKRD19PQ9H560 264 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 C20orf141Q9NUB4 165 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 TAS2R16Q9NYV7 291 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 NOX1Q9Y5S8 564 aa14.36□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 C11orf98E9PRG8 122 aa14.35□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 PDLIM1O00151 329 aa14.35□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 GYG2O15488 501 aa14.35□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 SLC43A1O75387 559 aa14.35□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 KRT33AO76009 404 aa14.35□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 THBDP07204 575 aa14.35□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 HLA-DOBP13765 273 aa14.35□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ITGA2P17301 1181 aa14.35□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 FUT1P19526 365 aa14.35□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 DNAJA1P31689 397 aaKnown RBP14.35□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 KRTAP10-9P60411 292 aa14.35□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ZP4Q12836 540 aa14.35□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 TRIM25Q14258 630 aaKnown RBP14.35□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 LCN8Q6JVE9 175 aa14.35□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ZNF730Q6ZMV8 503 aa14.35□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ABHD12BQ7Z5M8 362 aaPredicted RBP14.35□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ACOT11Q8WXI4 607 aaPredicted RBP14.35□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 CLPTM1LQ96KA5 538 aa14.35□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 LURAP1Q96LR2 239 aa14.35□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 NMNAT1Q9HAN9 279 aaPredicted RBP14.35□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 CRYBG3Q68DQ2 2970 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 A0A1W2PRQ8 180 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 CIB4A0PJX0 185 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 HTR3EA5X5Y0 456 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 RNF13O43567 381 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 RAD51DO75771 328 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 SERPINI2O75830 405 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ZNF432O94892 652 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 DIRAS1O95057 198 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 HRGP04196 525 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 FABP3P05413 133 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 H1F0P07305 194 aaKnown RBP14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ITGA5P08648 1049 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 IFI30P13284 250 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 MPGP29372 298 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 FOXG1P55316 489 aaPredicted RBP14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 LGALS3BPQ08380 585 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 DGCR6Q14129 220 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 STK11Q15831 433 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 C9orf135Q5VTT2 229 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 DHFR2Q86XF0 187 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 WFDC8Q8IUA0 241 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 NRMQ8IXM6 262 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 RNF113BQ8IZP6 322 aaKnown RBP14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ANKK1Q8NFD2 765 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 LIPHQ8WWY8 451 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 HSD17B8Q92506 261 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 CCDC124Q96CT7 223 aaKnown RBP14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 SLC7A6OSQ96CW6 309 aaPredicted RBP14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 BPIFA2Q96DR5 249 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ASB9Q96DX5 294 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 OR2M2Q96R28 347 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 PIP5K1AQ99755 562 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 POLDIP3Q9BY77 421 aaKnown RBP14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 LINC00470Q9BZP3 86 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 CLEC4MQ9H2X3 399 aaPredicted RBP14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 TAS2R5Q9NYW4 299 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 FREM1Q5H8C1 2179 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 CELSR2Q9HCU4 2923 aa14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 ANKHD1Q8IWZ3 2542 aaKnown RBP14.34□□□□□ -0.11
MSH5-SAPCD1-206ENST00000491552 A0A087WUU8 490 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 TCRBV5S2A0A599 114 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 DEFB108AA8MXU0 73 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 ZNF587BE7ETH6 402 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 BLOC1S5-TXNDC5H3BN57 136 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 SIAH2O43255 324 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 STAMBPO95630 424 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 LSM11P83369 360 aaKnown RBP eCLIP14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 MS4A2Q01362 244 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 TGFBR3Q03167 851 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 PRKCDQ05655 676 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 BNIP1Q12981 228 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 TAB1Q15750 504 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 IQCCQ4KMZ1 466 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 FGD3Q5JSP0 725 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 TIMM23BQ5SRD1 257 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 NHLRC1Q6VVB1 395 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 MBOAT2Q6ZWT7 520 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 TMEM123Q8N131 208 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 C1orf162Q8NEQ5 155 aaPredicted RBP14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 DHRS1Q96LJ7 313 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 ALKBH3Q96Q83 286 aaPredicted RBP14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 BTBD10Q9BSF8 475 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 EMC6Q9BV81 110 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 IL1RAPQ9NPH3 570 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 MED29Q9NX70 200 aa14.33□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 SLC35F4A4IF30 521 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 OR5H1A6NKK0 313 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 UPK3AO75631 287 aa14.32□□□□□ -0.12
MSH5-SAPCD1-206ENST00000491552 IFNGR1P15260 489 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms