RNA–Protein interactions for RNA: ENST00000491165.5

USF3-203, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USF3, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-203ENST00000491165 FANK1Q8TC84 345 aa20.69■□□□□ 0.9
USF3-203ENST00000491165 KCNE4Q8WWG9 221 aa20.69■□□□□ 0.9
USF3-203ENST00000491165 OR52D1Q9H346 318 aa20.69■□□□□ 0.9
USF3-203ENST00000491165 PRODH2Q9UF12 536 aa20.69■□□□□ 0.9
USF3-203ENST00000491165 OR6C70A6NIJ9 312 aa20.69■□□□□ 0.9
USF3-203ENST00000491165 KLK10O43240 276 aa20.69■□□□□ 0.9
USF3-203ENST00000491165 ZNF136P52737 540 aa20.69■□□□□ 0.9
USF3-203ENST00000491165 EEF1A1P68104 462 aaKnown RBP20.69■□□□□ 0.9
USF3-203ENST00000491165 SMARCD3Q6STE5 483 aa20.69■□□□□ 0.9
USF3-203ENST00000491165 YIPF7Q8N8F6 280 aa20.69■□□□□ 0.9
USF3-203ENST00000491165 ZNF441Q8N8Z8 693 aa20.69■□□□□ 0.9
USF3-203ENST00000491165 ALG8Q9BVK2 526 aa20.69■□□□□ 0.9
USF3-203ENST00000491165 FN3KQ9H479 309 aa20.69■□□□□ 0.9
USF3-203ENST00000491165 DUSP22Q9NRW4 184 aa20.69■□□□□ 0.9
USF3-203ENST00000491165 BABAM2Q9NXR7 383 aa20.69■□□□□ 0.9
USF3-203ENST00000491165 IGKV1D-16P01601 117 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 THBS1P07996 1170 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 ERP29P30040 261 aaKnown RBP20.68■□□□□ 0.9
USF3-203ENST00000491165 CTBP2P56545 445 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 B3GLCTQ6Y288 498 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 MEPCEQ7L2J0 689 aaKnown RBP20.68■□□□□ 0.9
USF3-203ENST00000491165 ZAR1Q86SH2 424 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 LIX1LQ8IVB5 337 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 ZNF248Q8NDW4 579 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 GRPEL2Q8TAA5 225 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 SNIP1Q8TAD8 396 aaKnown RBP20.68■□□□□ 0.9
USF3-203ENST00000491165 UPRTQ96BW1 309 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 STACQ99469 402 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 DPH1Q9BZG8 443 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 EXPH5Q8NEV8 1989 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 URB1O60287 2271 aaKnown RBP20.68■□□□□ 0.9
USF3-203ENST00000491165 TRAPPC13A5PLN9 417 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 ORC5O43913 435 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 HPP00738 406 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 ELK1P19419 428 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 IDNKQ5T6J7 187 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 FIGNL1Q6PIW4 674 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 TRILQ7L0X0 811 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 PRSS27Q9BQR3 290 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 MARVELD1Q9BSK0 173 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 MMP25Q9NPA2 562 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 EXTL2Q9UBQ6 330 aa20.68■□□□□ 0.9
USF3-203ENST00000491165 BSNQ9UPA5 3926 aa20.67■□□□□ 0.9
USF3-203ENST00000491165 DVL2O14641 736 aa20.67■□□□□ 0.9
USF3-203ENST00000491165 SLC43A1O75387 559 aa20.67■□□□□ 0.9
USF3-203ENST00000491165 PPICP45877 212 aa20.67■□□□□ 0.9
USF3-203ENST00000491165 NR0B1P51843 470 aaKnown RBP20.67■□□□□ 0.9
USF3-203ENST00000491165 GPR68Q15743 365 aa20.67■□□□□ 0.9
USF3-203ENST00000491165 Q5BKY6 102 aa20.67■□□□□ 0.9
USF3-203ENST00000491165 ZNF57Q68EA5 555 aaPredicted RBP20.67■□□□□ 0.9
USF3-203ENST00000491165 SLC29A4Q7RTT9 530 aa20.67■□□□□ 0.9
USF3-203ENST00000491165 PRR22Q8IZ63 422 aa20.67■□□□□ 0.9
USF3-203ENST00000491165 COX18Q8N8Q8 333 aa20.67■□□□□ 0.9
USF3-203ENST00000491165 SDF2Q99470 211 aa20.67■□□□□ 0.9
USF3-203ENST00000491165 MED20Q9H944 212 aa20.67■□□□□ 0.9
USF3-203ENST00000491165 ANKRD11Q6UB99 2663 aaPredicted RBP20.67■□□□□ 0.9
USF3-203ENST00000491165 CENPVL1A0A0U1RR11 272 aa20.66■□□□□ 0.9
USF3-203ENST00000491165 MED19A0JLT2 244 aaPredicted RBP20.66■□□□□ 0.9
USF3-203ENST00000491165 OR6C76A6NM76 312 aa20.66■□□□□ 0.9
USF3-203ENST00000491165 FAPQ12884 760 aa20.66■□□□□ 0.9
USF3-203ENST00000491165 EFR3AQ14156 821 aa20.66■□□□□ 0.9
USF3-203ENST00000491165 EXT1Q16394 746 aa20.66■□□□□ 0.9
USF3-203ENST00000491165 DCAF10Q5QP82 559 aa20.66■□□□□ 0.9
USF3-203ENST00000491165 HBMQ6B0K9 141 aa20.66■□□□□ 0.9
USF3-203ENST00000491165 FCRLBQ6BAA4 426 aa20.66■□□□□ 0.9
USF3-203ENST00000491165 VASH1Q7L8A9 365 aaPredicted RBP20.66■□□□□ 0.9
USF3-203ENST00000491165 M1APQ8TC57 530 aa20.66■□□□□ 0.9
USF3-203ENST00000491165 ZFAND1Q8TCF1 268 aa20.66■□□□□ 0.9
USF3-203ENST00000491165 LCORQ96JN0 433 aaPredicted RBP20.66■□□□□ 0.9
USF3-203ENST00000491165 HS6ST2Q96MM7 605 aa20.66■□□□□ 0.9
USF3-203ENST00000491165 UBL7Q96S82 380 aaPredicted RBP20.66■□□□□ 0.9
USF3-203ENST00000491165 TRIM36Q9NQ86 728 aa20.66■□□□□ 0.9
USF3-203ENST00000491165 DAPL1A0PJW8 107 aa20.66■□□□□ 0.9
USF3-203ENST00000491165 ZC3H12DA2A288 527 aaKnown RBP20.66■□□□□ 0.9
USF3-203ENST00000491165 BHLHE40O14503 412 aa20.66■□□□□ 0.9
USF3-203ENST00000491165 BMP7P18075 431 aa20.66■□□□□ 0.9
USF3-203ENST00000491165 RFX3P48380 749 aa20.66■□□□□ 0.9
USF3-203ENST00000491165 FXYD6P3P58550 94 aa20.66■□□□□ 0.9
USF3-203ENST00000491165 ZNHIT3Q15649 155 aaPredicted RBP20.66■□□□□ 0.9
USF3-203ENST00000491165 DCST2Q5T1A1 773 aa20.66■□□□□ 0.9
USF3-203ENST00000491165 NR2C2APQ86WQ0 139 aa20.66■□□□□ 0.9
USF3-203ENST00000491165 RNF113BQ8IZP6 322 aaKnown RBP20.66■□□□□ 0.9
USF3-203ENST00000491165 TMEM99Q8N816 258 aa20.66■□□□□ 0.9
USF3-203ENST00000491165 TBX5Q99593 518 aa20.66■□□□□ 0.9
USF3-203ENST00000491165 RPRD1BQ9NQG5 326 aaKnown RBP20.66■□□□□ 0.9
USF3-203ENST00000491165 ACOXLQ9NUZ1 547 aa20.66■□□□□ 0.9
USF3-203ENST00000491165 SIRT4Q9Y6E7 314 aaPredicted RBP20.66■□□□□ 0.9
USF3-203ENST00000491165 CHAF1BQ13112 559 aa20.65■□□□□ 0.9
USF3-203ENST00000491165 LRRC28Q86X40 367 aaPredicted RBP20.65■□□□□ 0.9
USF3-203ENST00000491165 OR5M3Q8NGP4 307 aa20.65■□□□□ 0.9
USF3-203ENST00000491165 NUBPLQ8TB37 319 aa20.65■□□□□ 0.9
USF3-203ENST00000491165 TMEM239Q8WW34 195 aa20.65■□□□□ 0.9
USF3-203ENST00000491165 TIMP4Q99727 224 aa20.65■□□□□ 0.9
USF3-203ENST00000491165 WACQ9BTA9 647 aa20.65■□□□□ 0.9
USF3-203ENST00000491165 GON7Q9BXV9 100 aa20.65■□□□□ 0.9
USF3-203ENST00000491165 ZNF350Q9GZX5 532 aa20.65■□□□□ 0.9
USF3-203ENST00000491165 CCDC86Q9H6F5 360 aaKnown RBP20.65■□□□□ 0.9
USF3-203ENST00000491165 ING3Q9NXR8 418 aa20.65■□□□□ 0.9
USF3-203ENST00000491165 A0A0G2JMP0 313 aa20.65■□□□□ 0.9
USF3-203ENST00000491165 A0A0X1KG70 313 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms