RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 CPEB2Q7Z5Q1 589 aaKnown RBP6.72□□□□□ -1.33
NPHP3-208ENST00000490993 EGFL6Q8IUX8 553 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 DND1Q8IYX4 353 aaKnown RBP6.72□□□□□ -1.33
NPHP3-208ENST00000490993 NUDT9Q9BW91 350 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 ULBP3Q9BZM4 244 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 CHRNA10Q9GZZ6 450 aa6.72□□□□□ -1.33
NPHP3-208ENST00000490993 C4orf51C9J302 202 aa6.71□□□□□ -1.33
NPHP3-208ENST00000490993 NCR1O76036 304 aa6.71□□□□□ -1.33
NPHP3-208ENST00000490993 SYNGR4O95473 234 aa6.71□□□□□ -1.33
NPHP3-208ENST00000490993 RAF1P04049 648 aa6.71□□□□□ -1.33
NPHP3-208ENST00000490993 HCKP08631 526 aa6.71□□□□□ -1.33
NPHP3-208ENST00000490993 HTR2AP28223 471 aa6.71□□□□□ -1.33
NPHP3-208ENST00000490993 FUT5Q11128 374 aa6.71□□□□□ -1.33
NPHP3-208ENST00000490993 ZNF74Q16587 644 aa6.71□□□□□ -1.33
NPHP3-208ENST00000490993 COL28A1Q2UY09 1125 aa6.71□□□□□ -1.33
NPHP3-208ENST00000490993 GFOD2Q3B7J2 385 aa6.71□□□□□ -1.33
NPHP3-208ENST00000490993 SOWAHCQ53LP3 525 aaPredicted RBP6.71□□□□□ -1.33
NPHP3-208ENST00000490993 TRIM61Q5EBN2 209 aa6.71□□□□□ -1.33
NPHP3-208ENST00000490993 VASNQ6EMK4 673 aa6.71□□□□□ -1.33
NPHP3-208ENST00000490993 OGFOD3Q6PK18 319 aa6.71□□□□□ -1.33
NPHP3-208ENST00000490993 ARIH2OSQ8N7S6 290 aa6.71□□□□□ -1.33
NPHP3-208ENST00000490993 OR8D4Q8NGM9 314 aa6.71□□□□□ -1.33
NPHP3-208ENST00000490993 C3orf49Q96BT1 292 aa6.71□□□□□ -1.33
NPHP3-208ENST00000490993 RBFOX1Q9NWB1 397 aaKnown RBP6.71□□□□□ -1.33
NPHP3-208ENST00000490993 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.71□□□□□ -1.34
NPHP3-208ENST00000490993 A0A1W2PPC1 479 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 A0A1W2PQD3 144 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 MEIOCA2RUB1 952 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 SIGLEC6O43699 453 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 SELENOFO60613 162 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 PNLIPP16233 465 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 ERP29P30040 261 aaKnown RBP6.71□□□□□ -1.34
NPHP3-208ENST00000490993 OTX2P32243 289 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 TGFBR1P36897 503 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 RNF4P78317 190 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 POU3F1Q03052 451 aaPredicted RBP6.71□□□□□ -1.34
NPHP3-208ENST00000490993 ISXQ2M1V0 245 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 CDH24Q86UP0 819 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 NKD1Q969G9 470 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 FAM46BQ96A09 425 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 SMIM19Q96E16 107 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 DNAJA3Q96EY1 480 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 TXNDC15Q96J42 360 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 POTEKPQ9BYX7 375 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 FBXO34Q9NWN3 711 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 CHRNA9Q9UGM1 479 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 CAMK2AQ9UQM7 478 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 PLEKHA6Q9Y2H5 1048 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 SULT1B1O43704 296 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 CSF1P09603 554 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 LIMS3P0CW19 117 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 LIMS4P0CW20 117 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 TRAPPC2P0DI81 140 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 TRAPPC2BP0DI82 140 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 OR8G3PP0DMU2 310 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 ANXA3P12429 323 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 ZNF28P17035 718 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 CAV3P56539 151 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 STARD6P59095 220 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 RPL18Q07020 188 aaKnown RBP6.71□□□□□ -1.34
NPHP3-208ENST00000490993 PUDPQ08623 228 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 CARD17Q5XLA6 110 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 MFSD4AQ8N468 514 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 SIRT6Q8N6T7 355 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 ELP5Q8TE02 316 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 NRSN2Q9GZP1 204 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 NIPAL2Q9H841 368 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 C20orf141Q9NUB4 165 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 TRAV6A0A075B6T7 132 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 TRAV1-2A0A0B4J238 106 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 PRAMEF27A3QJZ7 478 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 ANKUB1A6NFN9 424 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 SYT7O43581 403 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 FOXS1O43638 330 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 EIF1BO60739 113 aaKnown RBP6.71□□□□□ -1.34
NPHP3-208ENST00000490993 TBX6O95947 436 aaPredicted RBP6.71□□□□□ -1.34
NPHP3-208ENST00000490993 IGHA1P01876 353 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 GSTT2P0CG29 244 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 EPHA8P29322 1005 aaPredicted RBP6.71□□□□□ -1.34
NPHP3-208ENST00000490993 LTBRP36941 435 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 E2F1Q01094 437 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 FHL5Q5TD97 284 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 EEF1A1P5Q5VTE0 462 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 NRARPQ7Z6K4 114 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 DNAJC5GQ8N7S2 189 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 PLPP5Q8NEB5 264 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 OR4D9Q8NGE8 314 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 SYNPRQ8TBG9 265 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 PGAM5Q96HS1 289 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 CCDC74BQ96LY2 380 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 SYT4Q9H2B2 425 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 ZNF69Q9UC07 566 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 ICAM5Q9UMF0 924 aa6.71□□□□□ -1.34
NPHP3-208ENST00000490993 ALG1L2C9J202 215 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 PSMD9O00233 223 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 BHLHE40O14503 412 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 CYB5AP00167 134 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 SRMP19623 302 aa6.7□□□□□ -1.34
NPHP3-208ENST00000490993 RPS4Y1P22090 263 aaKnown RBP6.7□□□□□ -1.34
NPHP3-208ENST00000490993 CDK5R1Q15078 307 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms