RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 ZNF835Q9Y2P0 537 aa2.8□□□□□ -1.96
CCDC39-206ENST00000489868 IGLV3-22A0A075B6J6 115 aa2.79□□□□□ -1.96
CCDC39-206ENST00000489868 MBLAC1A4D2B0 266 aaPredicted RBP2.79□□□□□ -1.96
CCDC39-206ENST00000489868 TMEM150BA6NC51 233 aa2.79□□□□□ -1.96
CCDC39-206ENST00000489868 TBX19O60806 448 aa2.79□□□□□ -1.96
CCDC39-206ENST00000489868 B4GALT2O60909 372 aa2.79□□□□□ -1.96
CCDC39-206ENST00000489868 ZNF286BP0CG31 522 aa2.79□□□□□ -1.96
CCDC39-206ENST00000489868 ZNF30P17039 623 aa2.79□□□□□ -1.96
CCDC39-206ENST00000489868 CMA1P23946 247 aa2.79□□□□□ -1.96
CCDC39-206ENST00000489868 ELP6Q0PNE2 266 aa2.79□□□□□ -1.96
CCDC39-206ENST00000489868 PLD1Q13393 1074 aa2.79□□□□□ -1.96
CCDC39-206ENST00000489868 MESDQ14696 234 aa2.79□□□□□ -1.96
CCDC39-206ENST00000489868 PIANPQ8IYJ0 282 aa2.79□□□□□ -1.96
CCDC39-206ENST00000489868 FAM133AQ8N9E0 248 aa2.79□□□□□ -1.96
CCDC39-206ENST00000489868 ACOT4Q8N9L9 421 aa2.79□□□□□ -1.96
CCDC39-206ENST00000489868 UBALD1Q8TB05 177 aa2.79□□□□□ -1.96
CCDC39-206ENST00000489868 UBE2E3Q969T4 207 aa2.79□□□□□ -1.96
CCDC39-206ENST00000489868 NPAS2Q99743 824 aa2.79□□□□□ -1.96
CCDC39-206ENST00000489868 SMOXQ9NWM0 555 aa2.79□□□□□ -1.96
CCDC39-206ENST00000489868 HPF1Q9NWY4 346 aa2.79□□□□□ -1.96
CCDC39-206ENST00000489868 TMOD2Q9NZR1 351 aa2.79□□□□□ -1.96
CCDC39-206ENST00000489868 XCL2Q9UBD3 114 aa2.79□□□□□ -1.96
CCDC39-206ENST00000489868 PCYOX1Q9UHG3 505 aa2.79□□□□□ -1.96
CCDC39-206ENST00000489868 MMP17Q9ULZ9 603 aa2.79□□□□□ -1.96
CCDC39-206ENST00000489868 MRPS33Q9Y291 106 aaKnown RBP2.79□□□□□ -1.96
CCDC39-206ENST00000489868 PIKFYVEQ9Y2I7 2098 aa2.78□□□□□ -1.96
CCDC39-206ENST00000489868 RAMP3O60896 148 aa2.78□□□□□ -1.96
CCDC39-206ENST00000489868 ALDOBP05062 364 aa2.78□□□□□ -1.96
CCDC39-206ENST00000489868 UGT2B4P06133 528 aa2.78□□□□□ -1.96
CCDC39-206ENST00000489868 MRPL3P09001 348 aaKnown RBP2.78□□□□□ -1.96
CCDC39-206ENST00000489868 TSPY4P0CV99 314 aa2.78□□□□□ -1.96
CCDC39-206ENST00000489868 TSPY10P0CW01 314 aa2.78□□□□□ -1.96
CCDC39-206ENST00000489868 RPA2P15927 270 aa2.78□□□□□ -1.96
CCDC39-206ENST00000489868 RDXP35241 583 aaKnown RBP2.78□□□□□ -1.96
CCDC39-206ENST00000489868 SPIBQ01892 262 aa2.78□□□□□ -1.96
CCDC39-206ENST00000489868 GANABQ14697 944 aaKnown RBP2.78□□□□□ -1.96
CCDC39-206ENST00000489868 GNMTQ14749 295 aa2.78□□□□□ -1.96
CCDC39-206ENST00000489868 HSP90AA5PQ58FG0 334 aa2.78□□□□□ -1.96
CCDC39-206ENST00000489868 FAM86B1Q8N7N1 296 aa2.78□□□□□ -1.96
CCDC39-206ENST00000489868 CCDC54Q8NEL0 328 aa2.78□□□□□ -1.96
CCDC39-206ENST00000489868 IPMKQ8NFU5 416 aa2.78□□□□□ -1.96
CCDC39-206ENST00000489868 OR2L8Q8NGY9 312 aa2.78□□□□□ -1.96
CCDC39-206ENST00000489868 OR2G3Q8NGZ4 309 aa2.78□□□□□ -1.96
CCDC39-206ENST00000489868 DEDD2Q8WXF8 326 aa2.78□□□□□ -1.96
CCDC39-206ENST00000489868 DNAJC19Q96DA6 116 aa2.78□□□□□ -1.96
CCDC39-206ENST00000489868 SENP8Q96LD8 212 aa2.78□□□□□ -1.96
CCDC39-206ENST00000489868 LY9Q9HBG7 655 aa2.78□□□□□ -1.96
CCDC39-206ENST00000489868 SDAD1Q9NVU7 687 aaKnown RBP eCLIP2.78□□□□□ -1.96
CCDC39-206ENST00000489868 GIN1Q9NXP7 522 aa2.78□□□□□ -1.96
CCDC39-206ENST00000489868 CALYQ9NYX4 217 aa2.78□□□□□ -1.96
CCDC39-206ENST00000489868 YTHDF2Q9Y5A9 579 aaKnown RBP2.78□□□□□ -1.96
CCDC39-206ENST00000489868 COL1A2P08123 1366 aa2.77□□□□□ -1.97
CCDC39-206ENST00000489868 MROH7-TTC4A0A0A0MT08 1334 aa2.77□□□□□ -1.97
CCDC39-206ENST00000489868 ARPC3O15145 178 aa2.77□□□□□ -1.97
CCDC39-206ENST00000489868 IDH1O75874 414 aaKnown RBP2.77□□□□□ -1.97
CCDC39-206ENST00000489868 IGHV3-43DP0DP04 118 aa2.77□□□□□ -1.97
CCDC39-206ENST00000489868 HSPA5P11021 654 aaKnown RBP2.77□□□□□ -1.97
CCDC39-206ENST00000489868 GNA11P29992 359 aa2.77□□□□□ -1.97
CCDC39-206ENST00000489868 SMARCB1Q12824 385 aa2.77□□□□□ -1.97
CCDC39-206ENST00000489868 ABCA11PQ4W5N1 156 aa2.77□□□□□ -1.97
CCDC39-206ENST00000489868 LY6G6FQ5SQ64 297 aa2.77□□□□□ -1.97
CCDC39-206ENST00000489868 GET4Q7L5D6 327 aaPredicted RBP2.77□□□□□ -1.97
CCDC39-206ENST00000489868 ZADH2Q8N4Q0 377 aa2.77□□□□□ -1.97
CCDC39-206ENST00000489868 ZNF709Q8N972 641 aa2.77□□□□□ -1.97
CCDC39-206ENST00000489868 ACTRT1Q8TDG2 376 aa2.77□□□□□ -1.97
CCDC39-206ENST00000489868 MAIP1Q8WWC4 291 aa2.77□□□□□ -1.97
CCDC39-206ENST00000489868 RANBP3Q9H6Z4 567 aaPredicted RBP2.77□□□□□ -1.97
CCDC39-206ENST00000489868 YY1AP1Q9H869 796 aa2.77□□□□□ -1.97
CCDC39-206ENST00000489868 ZNF430Q9H8G1 570 aaPredicted RBP2.77□□□□□ -1.97
CCDC39-206ENST00000489868 NHEJ1Q9H9Q4 299 aaPredicted RBP2.77□□□□□ -1.97
CCDC39-206ENST00000489868 INPP5EQ9NRR6 644 aa2.77□□□□□ -1.97
CCDC39-206ENST00000489868 GLRX2Q9NS18 164 aa2.77□□□□□ -1.97
CCDC39-206ENST00000489868 SPATA7Q9P0W8 599 aa2.77□□□□□ -1.97
CCDC39-206ENST00000489868 IGSF9BQ9UPX0 1349 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 IQANK1A0A1B0GTG1 560 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 A8MXQ7 604 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 ENTPD5O75356 428 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 CTDNEP1O95476 244 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 GKN3PP0CG01 181 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 HPGDP15428 266 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 SOX6P35712 828 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 RPL13AP40429 203 aaKnown RBP2.76□□□□□ -1.97
CCDC39-206ENST00000489868 ACTA2P62736 377 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 ACTC1P68032 377 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 OR5I1Q13606 314 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 TPD52L1Q16890 204 aaPredicted RBP2.76□□□□□ -1.97
CCDC39-206ENST00000489868 C5orf47Q569G3 176 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 TMEM225Q6GV28 225 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 IGFL1Q6UW32 110 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 CCDC50Q8IVM0 306 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 ZNF615Q8N8J6 731 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 VN1R2Q8NFZ6 395 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 OR1N2Q8NGR9 330 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 TRMT10AQ8TBZ6 339 aaKnown RBP2.76□□□□□ -1.97
CCDC39-206ENST00000489868 FRZBQ92765 325 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 AURKBQ96GD4 344 aaPredicted RBP2.76□□□□□ -1.97
CCDC39-206ENST00000489868 C16orf45Q96MC5 204 aaPredicted RBP2.76□□□□□ -1.97
CCDC39-206ENST00000489868 SLC38A2Q96QD8 506 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 MTMR9Q96QG7 549 aa2.76□□□□□ -1.97
CCDC39-206ENST00000489868 UGT1A7Q9HAW7 530 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms