RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 IL32P24001 234 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 NTF4P34130 210 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 SLC9A3P48764 834 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 TGFBR3Q03167 851 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 PRKCDQ05655 676 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 GK3PQ14409 553 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 MS4A18Q3C1V0 323 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 OR7E24Q6IFN5 339 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 ZNF730Q6ZMV8 503 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 MBOAT2Q6ZWT7 520 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 RRM2BQ7LG56 351 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 CXorf67Q86X51 503 aaPredicted RBP9.79□□□□□ -0.84
CPSF7-212ENST00000489728 ZDHHC21Q8IVQ6 265 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 AQP12AQ8IXF9 295 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 CDK20Q8IZL9 346 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 ZNF295-AS1Q8N0V1 137 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 C17orf78Q8N4C9 275 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 SLC7A13Q8TCU3 470 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 CCDC124Q96CT7 223 aaKnown RBP9.79□□□□□ -0.84
CPSF7-212ENST00000489728 BPIFA2Q96DR5 249 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 LRR1Q96L50 414 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 ZNF385AQ96PM9 386 aaKnown RBP9.79□□□□□ -0.84
CPSF7-212ENST00000489728 MED18Q9BUE0 208 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 ACTR6Q9GZN1 396 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 STX18Q9P2W9 335 aaKnown RBP9.79□□□□□ -0.84
CPSF7-212ENST00000489728 SEC14L4Q9UDX3 406 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 PRSS50Q9UI38 385 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 HIF3AQ9Y2N7 669 aa9.79□□□□□ -0.84
CPSF7-212ENST00000489728 A0A087WUU8 490 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 FAM221AA4D161 298 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 A6NNC1 897 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 CENPBD1B2RD01 187 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 hCG_2039718K7EN88 272 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 PDLIM1O00151 329 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 CASKO14936 926 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 SLC43A1O75387 559 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 KRT36O76013 467 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 ZNF432O94892 652 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 ADAP00813 363 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 ADORA3P0DMS8 318 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 UMPSP11172 480 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 PAX7P23759 505 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 MPGP29372 298 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 YAP1P46937 504 aaKnown RBP9.78□□□□□ -0.84
CPSF7-212ENST00000489728 SH3BGRP55822 239 aaPredicted RBP9.78□□□□□ -0.84
CPSF7-212ENST00000489728 CLDN17P56750 224 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 RPS4XP62701 263 aaKnown RBP9.78□□□□□ -0.84
CPSF7-212ENST00000489728 MS4A2Q01362 244 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 POU3F1Q03052 451 aaPredicted RBP9.78□□□□□ -0.84
CPSF7-212ENST00000489728 TAF11Q15544 211 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 STK11Q15831 433 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 FAM98BQ52LJ0 330 aaKnown RBP9.78□□□□□ -0.84
CPSF7-212ENST00000489728 HIST2H2BCQ6DN03 193 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 NHLRC1Q6VVB1 395 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 CYP2R1Q6VVX0 501 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 TMPRSS11FQ6ZWK6 438 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 BHLHA15Q7RTS1 189 aaPredicted RBP9.78□□□□□ -0.84
CPSF7-212ENST00000489728 NRMQ8IXM6 262 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 UBE2J2Q8N2K1 259 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 LINC00471Q8N535 108 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 PFN4Q8NHR9 129 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 HSD17B8Q92506 261 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 ZNF775Q96BV0 537 aaPredicted RBP9.78□□□□□ -0.84
CPSF7-212ENST00000489728 FUZQ9BT04 418 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 NDEL1Q9GZM8 345 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 LRMDAQ9H2I8 198 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 MCCC2Q9HCC0 563 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 C20orf141Q9NUB4 165 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 RHCGQ9UBD6 479 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 UPB1Q9UBR1 384 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 CENPEQ02224 2701 aa9.78□□□□□ -0.84
CPSF7-212ENST00000489728 ZNF587BE7ETH6 402 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 LRRN3E7EW58 273 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 RPL36A-HNRNPH2H7BZ11 118 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 GSC2O15499 205 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 GADD45GO95257 159 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 HPRP00739 348 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 RAP2AP10114 183 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 IFI30P13284 250 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 FUT1P19526 365 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 PTNP21246 168 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 CBLP22681 906 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 CRYGSP22914 178 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 IGHV1-2P23083 117 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 AHCYP23526 432 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 EDNRAP25101 427 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 IFNGR2P38484 337 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 SELENOPP49908 381 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 DAP3P51398 398 aaKnown RBP9.77□□□□□ -0.85
CPSF7-212ENST00000489728 HMGA2P52926 109 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 PRPS1P60891 318 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 IL1RL1Q01638 556 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 TLE4Q04727 773 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 CHRNB3Q05901 458 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 FAPQ12884 760 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 FLOT2Q14254 428 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 FGD3Q5JSP0 725 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 TIMM23BQ5SRD1 257 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 TSPO2Q5TGU0 170 aa9.77□□□□□ -0.85
CPSF7-212ENST00000489728 NIPAL3Q6P499 406 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms