RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 RGS21Q2M5E4 152 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 SLC27A4Q6P1M0 643 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 GDF7Q7Z4P5 450 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 PROKR2Q8NFJ6 384 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 OR5M1Q8NGP8 315 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 TMEM163Q8TC26 289 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 SLC41A3Q96GZ6 507 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 COX4I2Q96KJ9 171 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 ZNF582Q96NG8 517 aaPredicted RBP17.44■□□□□ 0.38
CCM2-216ENST00000488727 PRR14Q9BWN1 585 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 PLA2G12AQ9BZM1 189 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 OR51E2Q9H255 320 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 EVA1AQ9H8M9 152 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 DIMT1Q9UNQ2 313 aaKnown RBP17.44■□□□□ 0.38
CCM2-216ENST00000488727 SLC6A5Q9Y345 797 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 TRGV5A0A0B4J1U4 118 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 TLX2O43763 284 aaPredicted RBP17.44■□□□□ 0.38
CCM2-216ENST00000488727 PFDN1O60925 122 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 THY1P04216 161 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 ZNF136P52737 540 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 B3GALT5-AS1P59052 145 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 HOXC5Q00444 222 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 QPRTQ15274 297 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 SSX1Q16384 188 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 KRTCAP3Q53RY4 240 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 MBOAT2Q6ZWT7 520 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 FGD2Q7Z6J4 655 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 CLDN22Q8N7P3 220 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 NANOGP1Q8N7R0 232 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 NEIL3Q8TAT5 605 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 LDAHQ9H6V9 325 aa17.44■□□□□ 0.38
CCM2-216ENST00000488727 TESQ9UGI8 421 aaKnown RBP17.44■□□□□ 0.38
CCM2-216ENST00000488727 NBASA2RRP1 2371 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 A0A1B0GTH9 108 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 A0A1B0GVC2 190 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 SUSD5O60279 629 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 RAB36O95755 333 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 HSMCR30P0CW71 290 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 EDN3P14138 238 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 PRKCAP17252 672 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 PGCP20142 388 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 GTF3C1Q12789 2109 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 TMEM44Q2T9K0 475 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 RRM2BQ7LG56 351 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 LSRQ86X29 649 aaPredicted RBP17.43■□□□□ 0.38
CCM2-216ENST00000488727 ZNF440Q8IYI8 595 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 GHDCQ8N2G8 530 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 CENPSQ8N2Z9 138 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 OR8D4Q8NGM9 314 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 POC1BQ8TC44 478 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 MIB2Q96AX9 1013 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 LRR1Q96L50 414 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 SLC38A2Q96QD8 506 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 EGLN3Q9H6Z9 239 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 SPRR3Q9UBC9 169 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 TNFRSF10DQ9UBN6 386 aa17.43■□□□□ 0.38
CCM2-216ENST00000488727 ZNF462Q96JM2 2506 aa17.42■□□□□ 0.38
CCM2-216ENST00000488727 A0A087WZY1 265 aa17.42■□□□□ 0.38
CCM2-216ENST00000488727 SNTNA6NMZ2 147 aa17.42■□□□□ 0.38
CCM2-216ENST00000488727 KDM4EB2RXH2 506 aaPredicted RBP17.42■□□□□ 0.38
CCM2-216ENST00000488727 MAGEB3O15480 346 aa17.42■□□□□ 0.38
CCM2-216ENST00000488727 PRODHO43272 600 aa17.42■□□□□ 0.38
CCM2-216ENST00000488727 HCN1O60741 890 aa17.42■□□□□ 0.38
CCM2-216ENST00000488727 SLC6A8P48029 635 aa17.42■□□□□ 0.38
CCM2-216ENST00000488727 GFRA1P56159 465 aa17.42■□□□□ 0.38
CCM2-216ENST00000488727 FOXF1Q12946 379 aa17.42■□□□□ 0.38
CCM2-216ENST00000488727 ITGADQ13349 1161 aa17.42■□□□□ 0.38
CCM2-216ENST00000488727 DOC2BQ14184 412 aa17.42■□□□□ 0.38
CCM2-216ENST00000488727 SPHARQ15513 63 aa17.42■□□□□ 0.38
CCM2-216ENST00000488727 SNAPC1Q16533 368 aa17.42■□□□□ 0.38
CCM2-216ENST00000488727 KLHL22Q53GT1 634 aa17.42■□□□□ 0.38
CCM2-216ENST00000488727 RAET1LQ5VY80 246 aa17.42■□□□□ 0.38
CCM2-216ENST00000488727 GDPGP1Q6ZNW5 385 aa17.42■□□□□ 0.38
CCM2-216ENST00000488727 RANBP3LQ86VV4 465 aaPredicted RBP17.42■□□□□ 0.38
CCM2-216ENST00000488727 NKAIN4Q8IVV8 208 aa17.42■□□□□ 0.38
CCM2-216ENST00000488727 OR52I1Q8NGK6 324 aa17.42■□□□□ 0.38
CCM2-216ENST00000488727 OSTF1Q92882 214 aa17.42■□□□□ 0.38
CCM2-216ENST00000488727 SLC35B4Q969S0 331 aa17.42■□□□□ 0.38
CCM2-216ENST00000488727 FAM46AQ96IP4 442 aaKnown RBP17.42■□□□□ 0.38
CCM2-216ENST00000488727 CENPOQ9BU64 300 aa17.42■□□□□ 0.38
CCM2-216ENST00000488727 FGF20Q9NP95 211 aaPredicted RBP17.42■□□□□ 0.38
CCM2-216ENST00000488727 KRCC1Q9NPI7 259 aaPredicted RBP17.42■□□□□ 0.38
CCM2-216ENST00000488727 LOC100506127A0A0U1RQW1 187 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 OR2M5A3KFT3 312 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 ETV2O00321 342 aaPredicted RBP17.41■□□□□ 0.38
CCM2-216ENST00000488727 FMO6PO60774 539 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 NTN1O95631 604 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 MLLT11Q13015 90 aaPredicted RBP17.41■□□□□ 0.38
CCM2-216ENST00000488727 GLYR1Q49A26 553 aaPredicted RBP17.41■□□□□ 0.38
CCM2-216ENST00000488727 GFRALQ6UXV0 394 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 ZNF550Q7Z398 422 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 BCDIN3DQ7Z5W3 292 aaKnown RBP17.41■□□□□ 0.38
CCM2-216ENST00000488727 BTLAQ7Z6A9 289 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 GTPBP8Q8N3Z3 284 aaPredicted RBP17.41■□□□□ 0.38
CCM2-216ENST00000488727 DRAXINQ8NBI3 349 aaPredicted RBP17.41■□□□□ 0.38
CCM2-216ENST00000488727 ZBTB8AQ96BR9 441 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 CHCHD6Q9BRQ6 235 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 EXO5Q9H790 373 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 IL20Q9NYY1 176 aa17.41■□□□□ 0.38
CCM2-216ENST00000488727 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms