RNA–Protein interactions for RNA: ENST00000488106.1

RHBDD3-205, Transcript of rhomboid domain containing 3, humanhuman

TSL 5

Gene RHBDD3, Length 640 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-205ENST00000488106 POLR2J2Q9GZM3 115 aaKnown RBP20.81■□□□□ 0.92
RHBDD3-205ENST00000488106 POLR2J3Q9H1A7 115 aaKnown RBP20.81■□□□□ 0.92
RHBDD3-205ENST00000488106 EGFL7Q9UHF1 273 aa20.81■□□□□ 0.92
RHBDD3-205ENST00000488106 RCE1Q9Y256 329 aa20.81■□□□□ 0.92
RHBDD3-205ENST00000488106 FLNAP21333 2647 aaKnown RBP20.81■□□□□ 0.92
RHBDD3-205ENST00000488106 VPS13CQ709C8 3753 aa20.81■□□□□ 0.92
RHBDD3-205ENST00000488106 USF3Q68DE3 2245 aa20.8■□□□□ 0.92
RHBDD3-205ENST00000488106 C11orf98E9PRG8 122 aa20.8■□□□□ 0.92
RHBDD3-205ENST00000488106 AKAP8O43823 692 aaKnown RBP20.8■□□□□ 0.92
RHBDD3-205ENST00000488106 UPK3AO75631 287 aa20.8■□□□□ 0.92
RHBDD3-205ENST00000488106 CD3EP07766 207 aa20.8■□□□□ 0.92
RHBDD3-205ENST00000488106 UMPSP11172 480 aa20.8■□□□□ 0.92
RHBDD3-205ENST00000488106 AHCYP23526 432 aa20.8■□□□□ 0.92
RHBDD3-205ENST00000488106 UGT2B15P54855 530 aa20.8■□□□□ 0.92
RHBDD3-205ENST00000488106 TGFBR3Q03167 851 aa20.8■□□□□ 0.92
RHBDD3-205ENST00000488106 TESK1Q15569 626 aa20.8■□□□□ 0.92
RHBDD3-205ENST00000488106 NCMAPQ5T1S8 102 aa20.8■□□□□ 0.92
RHBDD3-205ENST00000488106 OR5J2Q8NH18 312 aa20.8■□□□□ 0.92
RHBDD3-205ENST00000488106 PFN4Q8NHR9 129 aa20.8■□□□□ 0.92
RHBDD3-205ENST00000488106 HSH2DQ96JZ2 352 aa20.8■□□□□ 0.92
RHBDD3-205ENST00000488106 SLC19A3Q9BZV2 496 aa20.8■□□□□ 0.92
RHBDD3-205ENST00000488106 NANSQ9NR45 359 aa20.8■□□□□ 0.92
RHBDD3-205ENST00000488106 NPAP1Q9NZP6 1156 aa20.8■□□□□ 0.92
RHBDD3-205ENST00000488106 RNF115Q9Y4L5 304 aa20.8■□□□□ 0.92
RHBDD3-205ENST00000488106 PLPP3O14495 311 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 SLC43A1O75387 559 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 ZNF432O94892 652 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 OR6A2O95222 327 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 IFNW1P05000 195 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 ADORA3P0DMS8 318 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 CD53P19397 219 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 HOXC12P31275 282 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 YAP1P46937 504 aaKnown RBP20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 MXRA7P84157 204 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 ACKR1Q16570 336 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 IFI44LQ53G44 452 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 GKAP1Q5VSY0 366 aaPredicted RBP20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 CARD17Q5XLA6 110 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 FKBP9P1Q75LS8 142 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 CBLL1Q75N03 491 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 LINGO2Q7L985 606 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 LRRC17Q8N6Y2 441 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 FAM156AQ8NDB6 213 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 RBM15BQ8NDT2 890 aaKnown RBP20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 C1orf162Q8NEQ5 155 aaPredicted RBP20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 GEMIN6Q8WXD5 167 aaKnown RBP20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 PRRC1Q96M27 445 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 MUS81Q96NY9 551 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 TMEM204Q9BSN7 226 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 AMBRA1Q9C0C7 1298 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 FKRPQ9H9S5 495 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 MEPEQ9NQ76 525 aaPredicted RBP20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 MED29Q9NX70 200 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 SNX13Q9Y5W8 968 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 SLC25A15Q9Y619 301 aa20.79■□□□□ 0.92
RHBDD3-205ENST00000488106 LOC102725191A0A1B0GVB3 256 aa20.78■□□□□ 0.92
RHBDD3-205ENST00000488106 OR6C65A6NJZ3 312 aa20.78■□□□□ 0.92
RHBDD3-205ENST00000488106 FAM107AO95990 144 aa20.78■□□□□ 0.92
RHBDD3-205ENST00000488106 TCN1P20061 433 aaPredicted RBP20.78■□□□□ 0.92
RHBDD3-205ENST00000488106 ZNF83P51522 516 aa20.78■□□□□ 0.92
RHBDD3-205ENST00000488106 SLC25A3Q00325 362 aa20.78■□□□□ 0.92
RHBDD3-205ENST00000488106 ROR2Q01974 943 aaKnown RBP20.78■□□□□ 0.92
RHBDD3-205ENST00000488106 ADAM5Q6NVV9 412 aa20.78■□□□□ 0.92
RHBDD3-205ENST00000488106 ANKS4BQ8N8V4 417 aa20.78■□□□□ 0.92
RHBDD3-205ENST00000488106 KBTBD8Q8NFY9 601 aa20.78■□□□□ 0.92
RHBDD3-205ENST00000488106 TMEM239Q8WW34 195 aa20.78■□□□□ 0.92
RHBDD3-205ENST00000488106 MBD6Q96DN6 1003 aa20.78■□□□□ 0.92
RHBDD3-205ENST00000488106 OR2M2Q96R28 347 aa20.78■□□□□ 0.92
RHBDD3-205ENST00000488106 CCL19Q99731 98 aa20.78■□□□□ 0.92
RHBDD3-205ENST00000488106 FOXC2Q99958 501 aa20.78■□□□□ 0.92
RHBDD3-205ENST00000488106 EMC6Q9BV81 110 aa20.78■□□□□ 0.92
RHBDD3-205ENST00000488106 SLC17A5Q9NRA2 495 aa20.78■□□□□ 0.92
RHBDD3-205ENST00000488106 A4GNTQ9UNA3 340 aa20.78■□□□□ 0.92
RHBDD3-205ENST00000488106 NOX1Q9Y5S8 564 aa20.78■□□□□ 0.92
RHBDD3-205ENST00000488106 DPRXA6NFQ7 191 aa20.77■□□□□ 0.92
RHBDD3-205ENST00000488106 J3KTA2 159 aa20.77■□□□□ 0.92
RHBDD3-205ENST00000488106 MT-ND1P03886 318 aa20.77■□□□□ 0.92
RHBDD3-205ENST00000488106 RBM34P42696 430 aaKnown RBP20.77■□□□□ 0.92
RHBDD3-205ENST00000488106 DEFB113Q30KQ7 82 aa20.77■□□□□ 0.92
RHBDD3-205ENST00000488106 HIKESHIQ53FT3 197 aa20.77■□□□□ 0.92
RHBDD3-205ENST00000488106 HMBOX1Q6NT76 420 aa20.77■□□□□ 0.92
RHBDD3-205ENST00000488106 KLHL24Q6TFL4 600 aa20.77■□□□□ 0.92
RHBDD3-205ENST00000488106 C20orf204Q6ZNR8 217 aa20.77■□□□□ 0.92
RHBDD3-205ENST00000488106 SSX8Q7RTT4 187 aa20.77■□□□□ 0.92
RHBDD3-205ENST00000488106 SLC46A3Q7Z3Q1 461 aa20.77■□□□□ 0.92
RHBDD3-205ENST00000488106 NANOGNBQ7Z5D8 188 aa20.77■□□□□ 0.92
RHBDD3-205ENST00000488106 PGAM4Q8N0Y7 254 aa20.77■□□□□ 0.92
RHBDD3-205ENST00000488106 TMEM123Q8N131 208 aa20.77■□□□□ 0.92
RHBDD3-205ENST00000488106 GPR137CQ8N3F9 429 aa20.77■□□□□ 0.92
RHBDD3-205ENST00000488106 C17orf78Q8N4C9 275 aa20.77■□□□□ 0.92
RHBDD3-205ENST00000488106 AKAP1Q92667 903 aaKnown RBP eCLIP20.77■□□□□ 0.92
RHBDD3-205ENST00000488106 C1QTNF6Q9BXI9 259 aa20.77■□□□□ 0.92
RHBDD3-205ENST00000488106 LINC00470Q9BZP3 86 aa20.77■□□□□ 0.92
RHBDD3-205ENST00000488106 RHCGQ9UBD6 479 aa20.77■□□□□ 0.92
RHBDD3-205ENST00000488106 ZNF229Q9UJW7 825 aa20.77■□□□□ 0.92
RHBDD3-205ENST00000488106 HS3ST1O14792 307 aa20.76■□□□□ 0.91
RHBDD3-205ENST00000488106 PIP5K1CO60331 668 aa20.76■□□□□ 0.91
RHBDD3-205ENST00000488106 HIST1H2ABP04908 130 aa20.76■□□□□ 0.91
RHBDD3-205ENST00000488106 THRBP10828 461 aa20.76■□□□□ 0.91
RHBDD3-205ENST00000488106 IFNA8P32881 189 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms