RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 HSFY1Q96LI6 401 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 LINC00167Q96N53 147 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 PSKH2Q96QS6 385 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 OR2M2Q96R28 347 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 PLIN2Q99541 437 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 TMEM246Q9BRR3 403 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 RIOK2Q9BVS4 552 aaKnown RBP2.53□□□□□ -2
HMGB1P36-201ENST00000487709 SLC25A39Q9BZJ4 359 aaPredicted RBP2.53□□□□□ -2
HMGB1P36-201ENST00000487709 PKIBQ9C010 78 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 MFFQ9GZY8 342 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 PPA2Q9H2U2 334 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 NIPAL2Q9H841 368 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 FN3KRPQ9HA64 309 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 TM9SF3Q9HD45 589 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 DAZ3Q9NR90 486 aaKnown RBP2.53□□□□□ -2
HMGB1P36-201ENST00000487709 HOXC10Q9NYD6 342 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 SUN2Q9UH99 717 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 MMP17Q9ULZ9 603 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 PEX16Q9Y5Y5 336 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 CACNG2Q9Y698 323 aa2.53□□□□□ -2
HMGB1P36-201ENST00000487709 PHF3Q92576 2039 aaKnown RBP2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 TRBV6-6A0A0A6YYG2 114 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 A0A0G2JN53 185 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 OR52A4PA6NMU1 304 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 H3BNH8 94 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 HAS3O00219 553 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 XKRYO14609 159 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 SLC31A2O15432 143 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 NBR2O15453 112 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 FCMRO60667 390 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 HMMRO75330 724 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 WBP4O75554 376 aaKnown RBP2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 C2P06681 752 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 CAPN1P07384 714 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 CHTF8P0CG12 524 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 PSG2P11465 335 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 NPR2P20594 1047 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 PCMT1P22061 227 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 CCNE1P24864 410 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 OPRD1P41143 372 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 GSSP48637 474 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 ARFIP1P53367 373 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 PPP1R7Q15435 360 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 CTSL3PQ5NE16 218 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 OR2G6Q5TZ20 316 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 ZNF530Q6P9A1 599 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 IL34Q6ZMJ4 242 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 Q6ZVH6 145 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 PRSS41Q7RTY9 318 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 C6orf120Q7Z4R8 191 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 ZNF429Q86V71 674 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 C6orf223Q8N319 242 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 CEP112Q8N8E3 955 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 OR13C2Q8NGS9 318 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 EXOSC8Q96B26 276 aaKnown RBP2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 RPUSD4Q96CM3 377 aaKnown RBP2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 TRIM62Q9BVG3 475 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 SRMSQ9H3Y6 488 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 EML4Q9HC35 981 aaKnown RBP2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 ZNF331Q9NQX6 463 aaPredicted RBP2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 GNPTGQ9UJJ9 305 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 THSD7BQ9C0I4 1608 aa2.52□□□□□ -2.01
HMGB1P36-201ENST00000487709 IGKV1D-8A0A087WSZ0 117 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 A0A0B4J2A0 478 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 BTBD17A6NE02 478 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 C12orf77C9JDV5 145 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 LAD1O00515 517 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 CXCL11O14625 94 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 HSD17B6O14756 317 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 PSTPIP1O43586 416 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 ICOSLGO75144 302 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 SURF6O75683 361 aaKnown RBP2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 MMP1P03956 469 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 ALDOBP05062 364 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 FGF1P05230 155 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 CSF3P09919 207 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 CALM1P0DP23 149 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 CALM2P0DP24 149 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 CALM3P0DP25 149 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 MCF2P10911 925 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 RPS2P15880 293 aaKnown RBP2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 NCK1P16333 377 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 TNNI1P19237 187 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 FDFT1P37268 417 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 UCNP55089 124 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 SEC61GP60059 68 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 RPS14P62263 151 aaKnown RBP2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 CKAP4Q07065 602 aaKnown RBP2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 ZNF763Q0D2J5 394 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 UNC119Q13432 240 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 DDX39BQ13838 428 aaKnown RBP2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 DGUOKQ16854 277 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 ZBED5Q49AG3 693 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 OR2A2Q6IF42 318 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 KDM7AQ6ZMT4 941 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 COX15Q7KZN9 410 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 ENTHD1Q8IYW4 607 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 TMEM61Q8N0U2 210 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 ARIH2OSQ8N7S6 290 aa2.51□□□□□ -2.01
HMGB1P36-201ENST00000487709 FAM133AQ8N9E0 248 aa2.51□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms